Return to main results Retrieve Phyre Job Id

Job DescriptionP62558
Confidence99.90%DateThu Jan 5 12:07:38 GMT 2012
Rank2Aligned Residues154
% Identity12%Templated1vk1a_
SCOP infoParB/Sulfiredoxin ParB/Sulfiredoxin Hypothetical protein PF0380
Resolution1.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.........90.........100.. .......110 .........120.........130.. .......140...
Predicted Secondary structure 


















.

..






.



Query SS confidence 


































.







. .





















.










Query Sequence  EKTSRVWSGNERDQELLTEDALDDLIPSFLLTGQQ. TPAFGRRV. . SGVIEIADGSRRRKAAALTESD. YRVLVGELDDE
Query Conservation     
 
   
 
         
  
  

   

 . 
 


  .. 
 



 
 

 

    
  .
   
  
 
 
Alig confidence 


































.







..





















.










Template Conservation   
    
     

       
 

  

   
 
  



        
 

 
 

  
   

   

 

 
  
 
Template Sequence  KVEYVFIELDKMPHEQLVQRELEDFIESVTGSGIFWKPMLLAKIPGTDEYLIVDGHHRWAGLQKLGAKRAPSVILDYFDE
Template Known Secondary structure 



GGG


B




S

TTSS

T


TTST
Template Predicted Secondary structure 



































Template SS confidence 















































































   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   144. ....150...... ...160.........170.........180...... ...190.........200.........210..
Predicted Secondary structure  .........
.







.






Query SS confidence 

. . . . . . . . .










.





























.

























Query Sequence  QM. . . . . . . . . AALSRLGNDYR. PTSAYERGQRYASRLQNEFAGNISALADAE. NISRKIITRCINTAKLPKSVVALFSH
Query Conservation   
.........      

  
.


  
 
     

          

  
.
 
   


 
    

  
      
Alig confidence 

.........










.





























.

























Template Conservation     
           







 
   


     
         
    
        
   
  
 
    
   
 
Template Sequence  GVKVYTWYPAFGDVNVIERLKAEGLEVIEDEKAEEAEGEIAFALIGEKSFAIPGGLEEQKVSKVLDEMDQAEIELVYYGL
Template Known Secondary structure  T








TT



TTS





SSSSS

STTT






S
Template Predicted Secondary structure 









Template SS confidence 















































































   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   213......220..
Predicted Secondary structure 

Query SS confidence 









Query Sequence  PGELSARSGD
Query Conservation     
      
Alig confidence  .








Template Conservation  .         
Template Sequence  . KEDAKADME
Template Known Secondary structure  .
Template Predicted Secondary structure  .
Template SS confidence 









   182.......190
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions