Job Description P62558 Confidence 56.18% Date Thu Jan 5 12:07:38 GMT 2012 Rank 267 Aligned Residues 54 % Identity 7% Template d1rp3a2 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.30

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.		.
Query SS confidence																	.	.		.
Query Sequence		D	E	Q	M	A	A	L	S	R	L	G	N	D	Y	R	.	.	P	.	T	S	A	Y	E	R	G	Q	R	Y	A	S	R	L	Q	N	E	F	A	G	N	I	S	A	L	A	D	A	E	N	I	S	R	K	I	I	T	R	C	I	N
Query Conservation																	.	.		.
Alig confidence																	.	.		.																		.	.	.
Template Conservation																																						.	.	.
Template Sequence		E	E	E	V	I	K	R	E	L	T	E	K	V	K	E	A	V	S	K	L	P	E	R	E	K	L	V	I	Q	L	I	F	Y	E	E	L	.	.	.	P	A	K	E	V	A	K	I	L	E	T	S	V	S	R	V	S	Q	L	K	A
Template Known Secondary structure																			T	T	S													T	S			.	.	.									T	T	S
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions