 |
Job Description | P62558 | Confidence | 82.28% | Date | Thu Jan 5 12:07:38 GMT 2012 |
Rank | 88 | Aligned Residues | 37 |
% Identity | 11% | Template | c3sztB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:quorum-sensing control repressor; |
PDBTitle: quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone
|
Resolution | 2.55 Å |
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | A | Y | E | R | G | Q | R | Y | A | S | R | L | Q | N | E | F | A | G | N | I | S | A | L | A | D | A | E | N | I | S | R | K | I | I | T | R | C | I | N |
Query Conservation |   |
|
|   |   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
| . | . |
|
|   |
|   |
|   |
|   | . | . |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
L | T | A | R | E | T | E | . |
. |
M | L | K | W | T | A | V | G | K | . |
. |
T | Y | G | E | I | G | L | I | L | S | I | D | Q | R | T | V | K | F | H | I | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  | . | . |  |  |  |  |  |  | T | T |
| . | . |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  | . | . |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | |
|
. | . | . | . | . | . | . | 190 | . | |
|
. | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|