 |
Job Description | P62558 | Confidence | 50.44% | Date | Thu Jan 5 12:07:38 GMT 2012 |
Rank | 287 | Aligned Residues | 42 |
% Identity | 12% | Template | c3nqoB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:marr-family transcriptional regulator; |
PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
|
Resolution | 2.20 Å |
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | T | S | A | Y | E | R | G | Q | R | Y | A | S | R | L | Q | N | E | F | A | G | N | I | S | A | L | A | D | A | E | N | I | S | R | K | I | I | T | R | C | I | N |
Query Conservation |   |
|
|
|   |   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |
|   |   |   |
|
|
|   |   |
|   |
Template Sequence |   |
I | L | T | S | R | Q | Y | X | T | I | L | S | I | L | H | L | P | E | E | E | T | T | L | N | N | I | A | R | K | X | G | T | S | K | Q | N | I | N | R | L | V | A |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | S |
| G | G | G |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|