Job Description P62558 Confidence 99.81% Date Thu Jan 5 12:07:38 GMT 2012 Rank 4 Aligned Residues 113 % Identity 99% Template c3mkyP_ PDB info PDB header:dna binding protein/dna Chain: P: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-323)-18mer dna complex, i23 form Resolution 2.86 Å

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	A	Y	E	R	G	Q	R	Y	A	S	R	L	Q	N	E	F	A	G	N	I	S	A	L	A	D	A	E	N	I	S	R	K	I	I	T	R	C	I	N	T	A	K	L	P	K	S	V	V	A	L	F	S	H	P	G	E	L	S	A	R	S	G	D	A	L	Q	K	A	F	T	D	K	E	E	L	L	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	A	Y	E	R	G	Q	R	Y	A	S	R	L	Q	N	E	F	A	G	N	I	S	A	L	A	D	A	E	N	I	S	R	K	I	I	T	R	C	I	N	T	A	K	L	P	K	S	V	V	A	L	F	S	H	P	G	E	L	S	A	R	S	G	D	A	L	Q	K	A	F	T	D	K	E	E	L	L	K	Q
Template Known Secondary structure																	T	T	T	T	T										T	S													T	S							T	S	S	S	G	G	G	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	S	N	L	H	E	Q	K	K	A	G	V	I	F	E	A	E	E	V	I	T	L	L	T	S	V	L	K	T	S	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	S	N	L	H	E	Q	K	K	A	G	V	I	F	E	A	D	E	V	I	T	L	L	T	S	V	L	K	T	S	S	A
Template Known Secondary structure												T	T															T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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