Return to main results Retrieve Phyre Job Id

Job DescriptionP62558
Confidence68.60%DateThu Jan 5 12:07:38 GMT 2012
Rank188Aligned Residues25
% Identity16%Templatec3bwgA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk; PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.
Predicted Secondary structure 





Query SS confidence 
























Query Sequence  GNISALADAENISRKIITRCINTAK
Query Conservation       

  

 
   


 
    
Alig confidence 
























Template Conservation 


 


   



 


 

  
 
Template Sequence  PVLETLXAQFEVSKSTITKSLELLE
Template Known Secondary structure 

TT

Template Predicted Secondary structure 




Template SS confidence 
























   27..30.........40.........50.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions