Job Description P62558 Confidence 99.98% Date Thu Jan 5 12:07:38 GMT 2012 Rank 1 Aligned Residues 170 % Identity 19% Template c1vz0B_ PDB info PDB header:nuclear protein Chain: B: PDB Molecule:chromosome partitioning protein parb; PDBTitle: chromosome segregation protein spo0j from thermus2 thermophilus Resolution 2.3 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		K	T	S	R	V	W	S	G	N	E	R	D	Q	E	L	L	T	E	D	A	L	D	D	L	I	P	S	F	L	L	T	G	Q	Q	T	P	A	F	G	R	R	V	S	G	V	I	E	I	A	D	G	S	R	R	R	K	A	A	A	L	T	E	S	D	.	Y	R	V	L	V	G	E	L	D	D	E	Q	M	A	A
Query Conservation																																																																		.
Alig confidence																																																																		.
Template Conservation
Template Sequence		P	L	A	S	I	R	P	N	P	R	Q	P	R	K	R	F	A	E	E	S	L	K	E	L	A	D	S	I	R	E	K	G	L	L	Q	P	L	L	V	R	P	Q	G	D	G	Y	E	L	V	A	G	E	R	R	Y	R	A	A	L	M	A	G	L	Q	E	V	P	A	V	V	K	D	L	T	D	R	E	A	L	E
Template Known Secondary structure			G	G	G																														S	S								T	T																		T		S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	S	R	L	G	N	D	Y	R	.	P	T	S	A	Y	E	R	G	Q	R	Y	A	S	R	L	Q	N	E	F	A	G	N	I	S	A	L	A	D	A	E	N	I	S	R	K	I	I	T	R	C	I	N	T	A	K	L	P	K	S	V	V	A	L	F	S	H	P	G	E	L	S	A	R	S	G	D	A	L	Q	K
Query Conservation											.
Alig confidence											.																				.	.																																				.
Template Conservation																															.	.																																				.
Template Sequence		L	A	L	V	E	N	L	Q	R	E	D	L	S	P	V	E	E	A	R	G	Y	Q	A	L	L	E	M	G	L	.	.	T	Q	E	E	V	A	R	R	V	G	K	A	R	S	T	V	A	N	A	L	R	L	L	Q	L	P	P	E	A	L	E	A	L	E	R	.	G	E	I	T	A	G	H	A	R	A	L	L	M
Template Known Secondary structure								T	T	S	T	T																T	T		.	.										T												G	G	G	S											.	T	S	S										T
Template Predicted Secondary structure																															.	.																																				.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	T	D	K	E	E	L	L	K	Q	Q	A	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	P	E	D	R	L	W	G	L	K	E	I	L	E
Template Known Secondary structure		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions