Email l.a.kelley@imperial.ac.uk Description P24241 Date Thu Jan 5 11:41:33 GMT 2012 Unique Job ID 92a625dc854ea0d0

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3qnqD_ 100.0 14 PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system 2 c3ipjB_ 100.0 28 PDB header:transferase Chain: B: PDB Molecule:pts system, iiabc component; PDBTitle: the crystal structure of one domain of the pts system, iiabc component2 from clostridium difficile 3 c1ibaA_ 99.9 32 PDB header:phoshphotransferase Chain: A: PDB Molecule:glucose permease; PDBTitle: glucose permease (domain iib), nmr, 11 structures 4 d3bp8c1 99.9 32 Fold:Homing endonuclease-like Superfamily:Glucose permease domain IIB Family:Glucose permease domain IIB 5 c3sy6A_ 46.3 25 PDB header:cell adhesion Chain: A: PDB Molecule:fimbrial protein bf1861; PDBTitle: crystal structure of a fimbrial protein bf1861 [bacteroides fragilis2 nctc 9343] (bf1861) from bacteroides fragilis nctc 9343 at 1.90 a3 resolution 6 c2kncA_ 42.4 19 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 7 c3t2lA_ 39.0 13 PDB header:cell adhesion Chain: A: PDB Molecule:putative cell adhesion protein; PDBTitle: crystal structure of a putative cell adhesion protein (bf1858) from2 bacteroides fragilis nctc 9343 at 2.33 a resolution 8 c2janD_ 34.8 29 PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from mycobacterium tuberculosis in2 unliganded state 9 d1i1ga2 19.7 12 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 10 c2bbjB_ 15.7 20 PDB header:metal transport/membrane protein Chain: B: PDB Molecule:divalent cation transport-related protein; PDBTitle: crystal structure of the cora mg2+ transporter 11 c2hqnA_ 15.4 12 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 12 d1ffgb_ 14.7 13 Fold:Ferredoxin-like Superfamily:CheY-binding domain of CheA Family:CheY-binding domain of CheA 13 c2wshC_ 14.5 10 PDB header:hydrolase Chain: C: PDB Molecule:endonuclease ii; PDBTitle: structure of bacteriophage t4 endoii e118a mutant 14 c1a0oH_ 14.1 13 PDB header:chemotaxis Chain: H: PDB Molecule:chea; PDBTitle: chey-binding domain of chea in complex with chey 15 c2pmuD_ 13.6 21 PDB header:transcription regulation Chain: D: PDB Molecule:response regulator phop; PDBTitle: crystal structure of the dna-binding domain of phop 16 d1vgga_ 13.5 26 Fold:Ta1353-like Superfamily:Ta1353-like Family:Ta1353-like 17 c2xv4S_ 13.3 19 PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase iii subunit rpc3; PDBTitle: structure of human rpc62 (partial) 18 d1gxqa_ 12.8 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 19 d1ciya1 12.7 19 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 20 d1kgsa1 12.6 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 21 c2oarA_ not modelled 11.7 6 PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: mechanosensitive channel of large conductance (mscl) 22 c1vbkA_ not modelled 10.4 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1313; PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3 23 d2bgwa1 not modelled 10.3 13 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 24 d1ji6a1 not modelled 10.3 23 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 25 d1wlqc_ not modelled 9.3 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DNA replication factor Cdt1 26 c3ufiA_ not modelled 9.1 17 PDB header:cell adhesion Chain: A: PDB Molecule:hypothetical protein bacova_04980; PDBTitle: crystal structure of a hypothetical protein2 bacova_04980(zp_02067969.1) from bacteroides ovatus atcc 8483 at 2.183 a resolution 27 c1p68A_ not modelled 9.1 30 PDB header:de novo protein Chain: A: PDB Molecule:de novo designed protein s-824; PDBTitle: solution structure of s-824, a de novo designed four helix2 bundle 28 c2ekmC_ not modelled 8.0 33 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein st1511; PDBTitle: structure of st1219 protein from sulfolobus tokodaii 29 c2voyB_ not modelled 8.0 6 PDB header:hydrolase Chain: B: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus 30 d2oara1 not modelled 7.9 10 Fold:Gated mechanosensitive channel Superfamily:Gated mechanosensitive channel Family:Gated mechanosensitive channel 31 c1m6yA_ not modelled 7.7 20 PDB header:transferase Chain: A: PDB Molecule:s-adenosyl-methyltransferase mraw; PDBTitle: crystal structure analysis of tm0872, a putative sam-2 dependent methyltransferase, complexed with sah 32 d2cfua2 not modelled 7.7 16 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:Alkylsulfatase-like 33 c2ht2B_ not modelled 7.6 11 PDB header:membrane protein Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex 34 d1ngka_ not modelled 7.3 26 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 35 c2gl0A_ not modelled 7.3 33 PDB header:transferase Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: structure of pae2307 in complex with adenosine 36 c3ksiA_ not modelled 7.1 20 PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: structure of frmsr of staphylococcus aureus (complex with 2-propanol) 37 c2d16B_ not modelled 7.0 26 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ph1918; PDBTitle: crystal structure of ph1918 protein from pyrococcus horikoshii ot3 38 c2djwF_ not modelled 7.0 13 PDB header:unknown function Chain: F: PDB Molecule:probable transcriptional regulator, asnc family; PDBTitle: crystal structure of ttha0845 from thermus thermophilus hb8 39 c2cfuA_ not modelled 6.6 16 PDB header:hydrolase Chain: A: PDB Molecule:sdsa1; PDBTitle: crystal structure of sdsa1, an alkylsulfatase from2 pseudomonas aeruginosa, in complex with 1-decane-sulfonic-3 acid. 40 c2jzyA_ not modelled 6.3 19 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein pcor; PDBTitle: solution structure of c-terminal effector domain of2 putative two-component-system response regulator involved3 in copper resistance from klebsiella pneumoniae 41 c1oy8A_ not modelled 6.2 21 PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump 42 c2ketA_ not modelled 6.2 29 PDB header:antibiotic Chain: A: PDB Molecule:cathelicidin-6; PDBTitle: solution structure of bmap-27 43 c1lkzB_ not modelled 6.1 26 PDB header:isomerase Chain: B: PDB Molecule:ribose 5-phosphate isomerase a; PDBTitle: crystal structure of d-ribose-5-phosphate isomerase (rpia)2 from escherichia coli. 44 c1dlcA_ not modelled 6.0 21 PDB header:toxin Chain: A: PDB Molecule:delta-endotoxin cryiiia; PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution 45 d1fzda_ not modelled 6.0 30 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like 46 c2kscA_ not modelled 6.0 19 PDB header:unknown function Chain: A: PDB Molecule:cyanoglobin; PDBTitle: solution structure of synechococcus sp. pcc 7002 hemoglobin 47 c3ibwA_ not modelled 5.9 26 PDB header:transferase Chain: A: PDB Molecule:gtp pyrophosphokinase; PDBTitle: crystal structure of the act domain from gtp2 pyrophosphokinase of chlorobium tepidum. northeast3 structural genomics consortium target ctr148a 48 c3aq8A_ not modelled 5.8 22 PDB header:oxygen binding Chain: A: PDB Molecule:group 1 truncated hemoglobin; PDBTitle: crystal structure of truncated hemoglobin from tetrahymena pyriformis,2 q46e mutant, fe(iii) form 49 d2cfxa2 not modelled 5.7 13 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 50 c3k8hA_ not modelled 5.5 14 PDB header:membrane protein Chain: A: PDB Molecule:30klp; PDBTitle: structure of crystal form i of tp0453 51 d2cg4a2 not modelled 5.5 13 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 52 d1vbka2 not modelled 5.5 12 Fold:THUMP domain Superfamily:THUMP domain-like Family:THUMP domain 53 d1p2fa1 not modelled 5.5 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 54 d1s69a_ not modelled 5.3 19 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 55 c2j61B_ not modelled 5.3 39 PDB header:lectin Chain: B: PDB Molecule:ficolin-2; PDBTitle: l-ficolin complexed to n-acetylglucosamine (forme c) 56 d1m1jc1 not modelled 5.1 30 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like 57 d1x0pa1 not modelled 5.1 21 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:BLUF domain 58 d1lwub1 not modelled 5.1 22 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like