Job Description P24241 Confidence 9.31% Date Thu Jan 5 11:41:33 GMT 2012 Rank 25 Aligned Residues 79 % Identity 13% Template d1wlqc_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA replication factor Cdt1 Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.
Query Sequence		D	N	I	S	A	V	T	H	C	M	T	R	L	R	F	V	I	K	D	D	A	L	I	D	S	.	.	.	.	.	.	.	.	P	T	L	K	T	I	P	G	V	L	G	V	V	R	S	D	N	Q	C	Q	V	I	I	G	N	T	V	S	Q	A	F	Q	E	V	V	S	L	L	P	G	D	M	Q	P	A	Q	P
Query Conservation																											.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.																	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	V	K	Q	G	V	Q	E	X	X	R	K	R	F	E	E	R	N	V	G	Q	I	K	T	V	Y	P	X	S	Y	R	F	R	Q	E	C	N	V	P	T	F	K	D	S	I	K	R	S	.	D	Y	Q	L	T	I	E	P	L	L	G	Q	.	.	.	.	.	.	.	.	.	.	.	E	G	A	T	Q	L	T
Template Known Secondary structure													T	S															T	T	S										S	S			S				G	G	.	G									S	S		.	.	.	.	.	.	.	.	.	.	.				S	S
Template Predicted Secondary structure																																																			.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290												.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	K	P	K	L	T	L	R	R	I	G	A	G	I	L	D	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	C	L	L	Q	R	R	Q	V	F	R	Q	N	L	V	E	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions