Job Description P24241 Confidence 7.60% Date Thu Jan 5 11:41:33 GMT 2012 Rank 33 Aligned Residues 235 % Identity 11% Template c2ht2B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex Resolution 3.32 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.
Predicted Secondary structure																						.	.	.																																														.	.	.	.	.
Query SS confidence																						.	.	.																																														.	.	.	.	.
Query Sequence		I	P	V	T	A	V	K	Y	T	Y	T	V	I	P	A	L	V	M	T	W	.	.	.	C	L	S	Y	I	E	R	W	V	D	S	I	T	P	A	V	T	K	N	F	L	K	P	M	L	I	V	L	I	A	A	P	L	A	I	L	L	I	G	P	I	G	I	W	I	.	.	.	.	.	G	S	A	I	S	A	L
Query Conservation																						.	.	.																																														.	.	.	.	.
Alig confidence																						.	.	.																																														.	.	.	.	.
Template Conservation
Template Sequence		L	A	I	L	F	M	A	A	V	V	G	T	L	V	G	L	A	A	V	A	F	D	K	G	V	A	W	L	Q	N	Q	R	M	G	A	L	V	H	T	A	D	N	Y	P	L	L	L	T	V	A	F	L	C	S	A	V	L	A	M	F	G	Y	F	L	V	R	K	Y	A	P	E	A	G	G	S	G	I	P	E	I
Template Known Secondary structure																																								T		S																										T	T		G	G	G	S	S		S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	T	I	H	G	Y	L	G	W	L	S	V	A	I	M	G	A	L	W	P	L	L	V	M	T	G	M	H	R	V	F	T	P	T	I	I	Q	T	I	A	E	T	G	K	E	G	M	V	M	P	S	E	I	G	A	N	L	S	L	G	G	S	S	L	A	V	A	W	K	T	K	N	P	E	L	R	Q	T	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	A	L	E	D	Q	R	P	V	R	W	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	L	P	V	K	F	F	G	G	L	G	T	L	G	G	G	M	V	L	G	R	E	G	P	T	V	Q	I	G	G	N	I	G	R	M	V	L	D	I	F	R	L	K	G	D	E	A	R	H	T	L
Template Known Secondary structure						T	T		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T		S		B	S																			T	T			S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.																.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.																.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	A	A	A	S	A	I	M	A	G	I	S	E	P	A	L	Y	G	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	L	K	R	P	L	I	A	S	L	I	S	G	F	I	C	G	A	V	A	G	M	A	G	L	A	S	H	S	M	A	A	P	G	L	F	T	S	V	Q	F	F	D
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Template Conservation												.	.	.	.	.																																																																.	.
Template Sequence		L	A	T	G	A	A	A	G	L	A	.	.	.	.	.	A	A	F	N	A	P	L	A	G	I	L	F	I	I	E	E	M	R	P	Q	F	R	Y	T	L	I	S	I	K	A	V	F	I	G	V	I	M	S	T	I	M	Y	R	I	F	N	H	E	V	A	L	I	D	V	G	K	L	S	D	A	P	L	N	.	.
Template Known Secondary structure												.	.	.	.	.				T										T	T	T	T	S		S	S	S																									T	T			S											G	G	.	.
Template Predicted Secondary structure												.	.	.	.	.																																																																.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	N	P	M	S	I	V	W	V	F	A	V	M	A	L	A	V	V	L	S	F	I	L	T	L	L	L	G	F	E	D	I	P	V	E	E	A	A	A	Q	A	R	K
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	T	L	W	L	Y	L	I	L	G	I	I	F	G	I	F	G	P	I	F	N	K	W	V	L	G	M	Q	D	L	L	H	R	V	H	G	G	N	I	T	K
Template Known Secondary structure		.	.	.	.	G																																T	T	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions