Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC13
Confidence97.89%DateThu Jan 5 11:16:53 GMT 2012
Rank28Aligned Residues124
% Identity18%Templated1geqa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70......... 80.
Predicted Secondary structure 


































..........
Query SS confidence 



































































. . . . . . . . . .

Query Sequence  LSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVI. . . . . . . . . . PV
Query Conservation       





 








       
   
      







 






  
   

  

 ..........
 
Alig confidence 












.........













.






























..........

Template Conservation      


 

  
......... 
  
        
.  


 









  


 
  
   

  
         
Template Sequence  FKDGSLIPYLTAG. . . . . . . . . DPDKQSTLNFLLAL. DEYAGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWI
Template Known Secondary structure 

TTTT.........SS
.GGGBS



S

TTS
TT

Template Predicted Secondary structure 






.........


.


















Template SS confidence 















































































   2.......10.... .....20........ .30.........40.........50.........60.........70.
 
   82.......90.........100.. .......110.. .......120.........130.........140.....
Predicted Secondary structure 





........



..
















Query SS confidence 




















. . . . . . . .









. .
































Query Sequence  VEAIAQRFEVWISVDTSKPEV. . . . . . . . IRESAKVGAH. . IINDIRSLSEPGALEAAAETGLPVCLMHMQGNP
Query Conservation 
  
     






    
........  


  
  ..






  
       
     




  
 
Alig confidence 




















........









..
































Template Conservation 
  

     



  
 
     
   
   
   

 



 

  
            

  
 

 
 
 
Template Sequence  VKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTP
Template Known Secondary structure  TT





T

TT

GGGT

TT

Template Predicted Secondary structure 



























Template SS confidence 









































































   72.......80.........90.........100.........110.........120.........130.........140.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions