Job Description P0AC13 Confidence 97.53% Date Thu Jan 5 11:16:53 GMT 2012 Rank 32 Aligned Residues 228 % Identity 18% Template c3sz8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei Resolution 2.05 Å

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		4	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.
Predicted Secondary structure														.																																			.	.	.	.																											.
Query SS confidence														.																																			.	.	.	.																											.
Query Sequence		F	A	Q	G	T	S	L	D	L	S	H	P	.	H	V	M	G	I	L	N	V	T	P	D	S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	.	.	.	.	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	.	Q	R
Query Conservation														.																																			.	.	.	.																											.
Alig confidence														.										.	.	.	.	.	.	.	.	.	.																.	.	.	.																											.
Template Conservation																								.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	P	G	V	T	A	G	N	S	L	P	F	V	L	F	G	G	I	N	V	L	.	.	.	.	.	.	.	.	.	.	E	S	L	D	F	T	L	D	V	C	G	E	Y	V	A	V	T	R	K	L	G	I	P	F	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	V	G	L	D	E
Template Known Secondary structure				T	T					T	T	S												.	.	.	.	.	.	.	.	.	.																					T									S			T	T		S	S	T	T	S				S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.											.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																													.																								.
Query SS confidence																																													.																								.
Query Sequence		V	I	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	V	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	.	S	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	.	N	P	K	T	M	Q	E	A	P	K	Y	D
Query Conservation																																													.																								.
Alig confidence																																		.											.																								.						.	.	.	.	.	.	.
Template Conservation																																		.																																									.	.	.	.	.	.	.
Template Sequence		G	L	K	I	F	A	E	V	K	A	R	F	G	V	P	V	I	T	D	V	H	E	A	E	Q	A	A	P	V	A	E	I	.	A	D	V	L	Q	V	P	A	F	L	A	R	Q	T	D	L	V	V	A	I	A	K	A	G	K	P	V	N	V	K	K	P	Q	F	M	S	P	T	Q	L	.	.	.	.	.	.	.
Template Known Secondary structure																							S	G	G	G								.		S						G	G	G	T	T											T		S								T	T	S		T	T	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.																																									.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	.	.	N	L	P	L	L	V	G	M	S	R	K	S	M	I	G	Q	L	L	N	V	G	P	S
Query Conservation																																																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.														.																				.	.											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.														.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	K	H	V	V	S	K	C	G	E	V	G	N	D	.	R	V	M	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	.	.	M	L	G	F	R	Q	M	A	E	T	T	G	G	C	P	V	I	F	D	V	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.										T	T			.												S	S	S						.	.	T	T								T	T	T	S							T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.														.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												147	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.															.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	L	S	G	S	L	A	C	A	V	I	A	A	M	Q	G	A	H	.	.	I	I	R	V	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	E	T	V	E	A	M	R	V	V	E	A	T	L	S	A	K	E
Query Conservation																					.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																		.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	S	L	Q	V	L	D	L	A	R	A	G	I	A	V	G	I	A	G	L	F	L	E	A	H	P	D	P	D	R	A	R	P	S	A	L	P	L	H	Q	L	E	G	L	L	S	Q	M	K	A	I	D	D	L	V	K	R	M	P
Template Known Secondary structure		.	.	T																S								S		S	T	T								G	G	G																T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions