Job Description P0AC13 Confidence 97.19% Date Thu Jan 5 11:16:53 GMT 2012 Rank 39 Aligned Residues 229 % Identity 19% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.		.	.	.	.	70	.
Predicted Secondary structure																	.																																		.	.	.	.											.	.	.								.
Query SS confidence																	.																																		.	.	.	.											.	.	.								.
Query Sequence		M	K	L	F	A	Q	G	T	S	L	D	L	S	H	P	.	H	V	M	G	I	L	N	V	T	P	D	S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	.	.	.	.	N	A	G	A	T	I	I	D	V	G	.	.	.	G	E	S	T	R	P	G	.	A	A	E	V	S	V
Query Conservation																	.																																		.	.	.	.											.	.	.								.
Alig confidence																	.										.	.	.	.	.	.	.	.	.	.															.	.	.	.											.	.	.								.
Template Conservation																											.	.	.	.	.	.	.	.	.	.
Template Sequence		M	D	I	K	I	N	D	I	T	L	G	N	N	S	P	F	V	L	F	G	G	I	N	V	L	.	.	.	.	.	.	.	.	.	.	E	S	L	D	S	T	L	Q	T	C	A	H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L
Template Known Secondary structure							T	T					T	T	S												.	.	.	.	.	.	.	.	.	.																					T									S			T	T	S		T	T	S				S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.											.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	V	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	.	S	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E
Query Conservation																																																			.
Alig confidence							.	.	.	.																														.											.																					.	.							.	.
Template Conservation							.	.	.	.																														.																																.	.							.	.
Template Sequence		E	E	G	L	K	.	.	.	.	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	D	V	H	E	P	H	Q	C	Q	P	V	A	E	V	.	C	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	G	N	V	V	N	I	K	K	.	.	P	Q	F	L	S	P	.	.
Template Known Secondary structure							.	.	.	.																			S											.		S						G	G	G	T	T																				.	.		T	T	S		G	.	.
Template Predicted Secondary structure							.	.	.	.																														.																																.	.							.	.
Template SS confidence
		71	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																															.																						.	.	.	.
Query SS confidence																																															.																						.	.	.	.
Query Sequence		A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	.	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	L	L	V	.	.	.	.	G	M	S	R	K	S	M	I	G
Query Conservation																																															.																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																	.																	.															.							.	.	.	.								.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																	.																																.																		.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	.	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	G	V	M	K	Q	T	C	G	.	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	G	G											T	T			.												S	S	S						T										T	T	.	T							T	T	T	T		S	S	G	G	G	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																	.																																.																		.	.
Template SS confidence
														142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.										.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.							.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.							.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	L	N	V	G	P	S	E	R	L	S	G	S	L	A	C	A	V	I	A	A	M	Q	G	A	H	.	.	I	I	R	V	H	D	.	.	.	.	.	.	.	.	.	V	K	E	T	V	E	A	M	R	V	V	E	A	T	L	S	A	K	E
Query Conservation																													.	.							.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.															.	.							.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	D	L	A	L	A	G	M	A	T	R	L	A	G	L	F	L	E	S	H	P	D	P	S	A	L	P	L	H	L	L	E	D	F	L	I	R	I	K	A	L	D	D	L	I	K	S	Q	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.										T	T			S												S			G	G	G																		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions