Job Description P0AC13 Confidence 43.39% Date Thu Jan 5 11:16:53 GMT 2012 Rank 420 Aligned Residues 168 % Identity 15% Template c3qxbB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution Resolution 1.90 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.														.	.											.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.														.	.											.	.	.	.
Template Sequence		C	F	A	V	K	R	.	W	L	E	P	D	R	L	A	G	L	V	R	D	.	.	D	L	G	L	E	Y	V	Q	Y	T	.	.	.	.	Y	D	L	T	D	P	W	W	P	D	I	E	R	D	R	R	A	I	A	Y	A	K	A	F	R	K	A	G	L	T	I	E	S	T	F	G	G	L	A	S	Y	T	Y	N
Template Known Secondary structure		G	G	G	T	T	T	.	S		S											.	.	T	T									.	.	.	.	T	T	T	S		T	T	S																			T	T														T	S
Template Predicted Secondary structure								.														.	.											.	.	.	.
Template SS confidence
		8	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
				96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.																																																										.
Query SS confidence		.	.																																																										.
Query Sequence		.	.	D	T	S	K	P	E	V	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	S	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	.	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C
Query Conservation		.	.																																																										.
Alig confidence		.	.															.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	F	L	A	P	T	L	E	L	Q	S	L	G	Y	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	L	K	R	A	I	D	X	T	A	A	X	E	V	P	A	T	G	X	P	F	G	S	Y	S	A	A	D	A	L	N	P	A	R	R	E	E	I	Y	A	I	A	R	D	X	W	I	E	L	A	A	Y	A
Template Known Secondary structure		B	T	T		S	S											.	.	.	.	.	.	.	.	.	.	.	.											T	T		S							B	B							T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.													.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	.	.	.	.	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	L	L	V
Query Conservation																		.	.	.	.
Alig confidence							.	.	.									.	.	.	.
Template Conservation							.	.	.
Template Sequence		K	R	Q	G	L	.	.	.	S	X	L	Y	V	E	P	V	P	L	A	T	E	F	P	S	S	A	A	D	A	A	R	L	X	A	D	L	D	G	R	T	E	I	P	V	R	L	L	V
Template Known Secondary structure					T		.	.	.									S		T	T	B	S	S		S												T	T	T	S	S	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		149	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions