Job Description P0AC13 Confidence 56.12% Date Thu Jan 5 11:16:53 GMT 2012 Rank 360 Aligned Residues 152 % Identity 20% Template c3qldB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: structure of probable mandelate racemase (aalaa1draft_2112) from2 alicyclobacillus acidocaldarius Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.									.	.	.
Query SS confidence																																																												.									.	.	.
Query Sequence		G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	.	E	V	W	I	S	V	D	T	.	.	.	S	K	P	E	V	I	R	E	S	A
Query Conservation																																																												.									.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.										.	.	.	.									.									.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Sequence		G	X	S	E	S	L	D	V	L	I	Q	S	V	D	A	A	V	E	Q	G	F	R	R	V	K	L	K	.	.	.	.	.	.	.	.	.	.	I	A	P	G	R	D	R	A	A	.	.	.	.	I	K	A	V	R	L	R	Y	P	D	L	A	I	A	A	D	A	N	G	S	Y	R	P	E	D	A	P	V	L	R
Template Known Secondary structure					S															T	T		S						.	.	.	.	.	.	.	.	.	.		B	T	T	B	S				.	.	.	.									T	T	S							T	T				G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170											.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		108	.				110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure				.	.	.														.
Query SS confidence				.	.	.														.
Query Sequence		K	V	.	.	.	G	A	H	I	I	N	D	I	R	S	L	S	E	.	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L
Query Conservation				.	.	.														.
Alig confidence				.	.	.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		Q	L	D	A	Y	D	L	Q	F	I	E	Q	P	L	P	E	D	D	W	F	D	L	A	K	L	Q	A	S	L	R	T	P	V	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	S	V	R	S	V	R	E	L	K	L	T	A	R	L	G	A	A	R	.	.	V	L	N
Template Known Secondary structure			G	G	G	G			S						S		T	T											T		S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T			S											T			S	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.
		184	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		L	D	P	.	.	.	.	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	L	L	V	G	M	S	R	K	S	M	I	G	Q	L	L
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.				.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		V	K	P	G	R	L	G	G	F	G	.	.	.	.	.	.	.	.	.	A	T	L	R	A	L	D	V	A	G	E	A	G	X	A	A	W	V	G	G	X	Y	E	T	G	V	G	R	V	H
Template Known Secondary structure								T	S			.	.	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.										.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions