Job Description P0AC13 Confidence 97.57% Date Thu Jan 5 11:16:53 GMT 2012 Rank 31 Aligned Residues 200 % Identity 20% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	T	S	L	D	L	S	H	P	H	V	M	G	I	L	N	V	T	P	D	S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I
Query Conservation
Alig confidence																				.	.			.	.	.	.	.	.	.	.	.																							.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.			.	.	.	.	.	.	.	.	.																							.	.						.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	V	K	I	G	N	G	Y	F	T	I	I	A	G	P	S	V	.	.	E	G	.	.	.	.	.	.	.	.	.	R	E	M	L	M	E	T	A	H	F	L	S	E	L	G	V	K	V	L	R	G	G	.	.	A	Y	K	L	G	.	.	.	.	.	.	.	.	.	.	E	K	G	L	E	Y	L	R	E	A
Template Known Secondary structure		S	S				S	T	T											.	.			.	.	.	.	.	.	.	.	.														T	T								.	.				.		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.			.	.	.	.	.	.	.	.	.																							.	.						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.											.	.	.	.	.	.	.	140	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	V	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	.	S	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y
Query Conservation																																					.
Alig confidence																										.											.																			.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																														.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	K	Y	G	M	Y	V	V	T	E	A	L	G	E	D	D	L	P	K	V	A	E	Y	.	A	D	I	I	Q	I	G	A	R	N	A	Q	N	F	R	L	L	S	K	A	G	S	Y	N	K	P	V	L	L	.	.	K	R	G	F	M	N	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E
Template Known Secondary structure					T	T									S	G	G	G								.		S						G	G	G	T	T									G	G	G		S					.	.				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.																														.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.															.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																								.	.																								.
Query SS confidence																								.	.																								.
Query Sequence		F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	.	.	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	.	F	N	L	P	L	L	V	G	M	S	R	K	S	M	I	G	Q	L	L	N	V	G	P	S	E	R	L	S	G	S	L	A
Query Conservation																								.	.																								.
Alig confidence																.	.							.	.															.									.						.									.	.	.	.	.	.	.	.
Template Conservation																.	.																							.															.									.	.	.	.	.	.	.	.
Template Sequence		F	L	L	S	A	E	Y	I	A	N	S	G	N	T	.	.	K	I	I	L	C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	I	.	S	A	V	P	I	I	R	K	E	S	H	L	P	I	.	L	V	D	P	S	H	S	G	.	.	.	.	.	.	.	.	G	R	R	D	L	V	I	P	L	S
Template Known Secondary structure												T	T			.	.									B			S		S	S	S	S	S	B			T	.	T									B	S	S			.				T	T	T	T	T	.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure																.	.																							.															.									.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.									.	.	.	.	.	280	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	V	I	A	A	M	Q	G	A	H	I	I	R	V	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	A	I	A	V	G	A	H	G	I	I	V	E	V	H
Template Known Secondary structure								T		S						B
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions