Job Description P0AC13 Confidence 98.40% Date Thu Jan 5 11:16:53 GMT 2012 Rank 24 Aligned Residues 192 % Identity 22% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.											80	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	H	V	M	G	I	L	N	V	T	P	D	S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	.	.	.	.	.	.	.	.	.	.	P	V	V	E
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	A	F	V	P	F	V	T	I	G	.	.	.	.	.	.	.	.	.	D	P	N	P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C	F	E	L	I	A
Template Known Secondary structure		B									T	T	.	.	.	.	.	.	.	.	.	S	S															T	T		S	S										T	T																T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.										.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		84	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure							.															.	.	.	.	.	.	.	.											.	.
Query SS confidence							.															.	.	.	.	.	.	.	.											.	.
Query Sequence		A	I	A	Q	R	.	F	E	V	W	I	S	V	D	T	S	K	P	E	V	.	.	.	.	.	.	.	.	I	R	E	S	A	K	V	G	A	H	.	.	I	I	N	D	I	R	S	L	S	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P
Query Conservation							.															.	.	.	.	.	.	.	.											.	.
Alig confidence							.															.	.	.	.	.	.	.	.											.	.																																			.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		Q	I	R	A	R	N	P	E	T	P	I	G	L	L	M	Y	A	N	L	V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	A	D	V	P	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	P	T	A	S	D	.	.	.	.	.	.
Template Known Secondary structure								T	T	S													T	T													T							T	T	S		G	G	G											T	T									T	T			S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.									.	.
Query SS confidence																																																											.									.	.
Query Sequence		K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	.	F	N	L	P	L	L	V	G	.	.	M	S	R	K	S	M	I	G	Q	L	L	N
Query Conservation																																																											.									.	.
Alig confidence		.	.	.	.	.	.	.									.	.	.	.	.						.	.	.	.									.	.	.	.	.	.	.	.	.	.											.									.	.
Template Conservation		.	.	.	.	.	.	.									.	.	.	.	.						.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	T	L	R	A	V	A	Q	.	.	.	.	.	L	G	K	G	Y	.	.	.	.	T	Y	L	L	S	R	A	P	.	.	.	.	.	.	.	.	.	.	V	H	A	L	L	E	R	L	Q	Q	F	D	A	P	P	A	L	L	G	F	G	I	S	E	P	A	Q	V	K	Q	A	I	E
Template Known Secondary structure		.	.	.	.	.	.	.									.	.	.	.	.				S		.	.	.	.									.	.	.	.	.	.	.	.	.	.											T	T								S	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.									.	.	.	.	.						.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template SS confidence
									161	.	.	.	.	.	.	.						.	170	.	.	.					.	.	.	.	.	.	180	.											.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	P	S	E	R	L	S	G	S	L	A	C	A	V	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	A	A	G	A	I	S	G	S	A	V	V	K	I	I	E
Template Known Secondary structure		T	T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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