Job Description P0AC13 Confidence 96.30% Date Thu Jan 5 11:16:53 GMT 2012 Rank 55 Aligned Residues 191 % Identity 17% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

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		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		M	K	L	F	A	Q	G	T	.	S	L	D	L	S	H	P	H	V	M	G	I	L	N	V	T	P	D	S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I
Query Conservation										.
Alig confidence										.																	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		M	K	T	V	T	V	R	D	L	V	V	G	E	G	A	P	K	I	I	V	S	L	M	G	K	.	.	.	.	.	.	.	.	.	.	.	T	I	T	D	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	.	.	.	.	.	.	.	R	V	D	H	F	A	N	V	T	T	A	E	S	V	L
Template Known Secondary structure		T	T					T	T				T	S	S	S										S	.	.	.	.	.	.	.	.	.	.	.	S												T	T	S			S					.	.	.	.	.	.	.		G	G	G		T	T	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.												.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	S	E	.	.	.	.	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		E	A	A	G	A	I	R	E	I	I	T	D	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	L	T	T	G	Q	Y	I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	A	V	I	M	S	N
Template Known Secondary structure													S	S									G	G	G	T		S	S																		S			S						G	G	G															T	T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		141			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.		.	.
Predicted Secondary structure			.	.																																																																							.	.			.
Query SS confidence			.	.																																																																							.	.			.
Query Sequence		M	.	.	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	.	.	L	P	.	L	L
Query Conservation			.	.																																																																							.	.			.
Alig confidence			.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																					.	.			.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		H	D	F	H	K	T	P	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	V	Q	R	L	R	K	M	Q	E	L	G	A	D	I	P	K	I	A	V	M	P	.	.	.	.	.	Q	T	K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A	D	R	P	I	I	T
Template Known Secondary structure				S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S									.	.	.	.	.	S	S																		T		S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.																.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	M	S	R	K	S	M	I	G	Q	L	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	S	M	S	K	T	G	V	I	S	R	L	A	G
Template Known Secondary structure					T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions