Job Description P0AC13 Confidence 72.34% Date Thu Jan 5 11:16:53 GMT 2012 Rank 275 Aligned Residues 148 % Identity 11% Template c3ktcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution Resolution 1.54 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.										.	.	.	.												.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.										.	.	.	.												.	.	.	.	.	.	.	.
Template Sequence		V	D	G	Y	G	P	A	L	S	T	I	D	Q	I	N	A	A	K	E	V	.	.	G	E	L	S	Y	V	D	L	P	.	.	.	.	Y	P	F	T	P	G	V	T	L	S	E	.	.	.	.	.	.	.	.	V	K	D	A	L	K	D	A	G	L	K	A	I	G	I	T	P	E	I	Y	L	Q	K	W	S	R
Template Known Secondary structure		T	T		S	S																.	.	S	S								.	.	.	.		S		S	T	T						.	.	.	.	.	.	.	.									T										T	T	S	G	G	G	T	T
Template Predicted Secondary structure																						.	.										.	.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
				95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	D	T	S	K	P	E	V	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	S	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C
Query Conservation		.	.
Alig confidence		.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	F	T	N	P	D	P	A	A	R	A	A	A	F	E	L	.	.	.	.	.	.	.	.	.	.	.	.	X	H	E	S	A	G	I	V	R	E	L	G	A	N	Y	V	K	V	W	P	G	Q	D	G	W	D	Y	P	F	Q	V	S	H	K	N	L	W	K	L	A	V	D	G	X	R	D	L	A	G	A	N
Template Known Secondary structure			S	T	T		S	S											.	.	.	.	.	.	.	.	.	.	.	.												T		S							T	T				S	S	T	T	S	S																			T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.													.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	.	.	.	.	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L
Query Conservation																	.	.	.	.
Alig confidence							.	.	.								.	.	.	.
Template Conservation							.	.	.
Template Sequence		P	D	V	K	F	.	.	.	A	I	E	Y	K	P	R	E	P	R	V	K	X	T	W	D	S	A	A	R	T	L	L	G	I	E	D	I
Template Known Secondary structure		T	T	S			.	.	.						S		S	S	S	S			S	S		S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		159	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions