Job Description P0AC13 Confidence 97.42% Date Thu Jan 5 11:16:53 GMT 2012 Rank 35 Aligned Residues 185 % Identity 20% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	T	S	L	D	L	S	H	P	H	V	M	G	I	L	N	V	T	P	D	S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		K	N	I	T	I	G	E	G	R	P	K	I	C	V	P	I	I	G	K	.	.	.	.	.	.	.	.	.	.	.	N	K	K	D	I	I	K	E	A	K	E	L	K	D	A	C	L	D	I	I	E	W	.	.	.	.	.	.	.	R	V	D	F	F	E	N	V	E	N	I	K	E	V	K	E	V	L	Y	E	L
Template Known Secondary structure		T	T				T	S	S	S										S	.	.	.	.	.	.	.	.	.	.	.	S											T	T	T	S	S		S					.	.	.	.	.	.	.		G	G	G		T	T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																		.	.	.	.														.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																		.	.	.	.														.	.
Query Sequence		A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	R	E	S	A	K	V	G	.	A	H	I	I	N	D	I	R	S	L	S	E	P	G	A	L	E	.	.	.	.	A	A	A	E	T	G	L	P	V	C	L	M	H	.	.	M	Q	G
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																		.	.	.	.														.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.					.													.	.	.	.														.	.
Template Conservation																																															.
Template Sequence		R	S	Y	I	H	D	I	P	L	L	F	T	F	R	S	V	V	E	G	G	E	K	L	I	S	R	D	Y	Y	T	T	L	N	K	E	I	S	N	T	G	L	V	D	L	I	.	D	V	E	L	F	M	G	D	E	V	I	D	E	V	V	N	F	A	H	K	K	E	V	K	V	I	I	S	N	H	D	F	N	K
Template Known Secondary structure						T	T	S									G	G	G	T		S																		T	S			S			.				G	G	G															T	T										S	S
Template Predicted Secondary structure																																															.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	.	.	.	L	L	V	G	M	S	R
Query Conservation																																																																								.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																							.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		T	P	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A	D	L	P	K	I	A	V	M	P	.	.	.	.	.	Q	N	E	K	D	V	L	V	L	L	E	A	T	N	E	M	F	K	I	Y	A	D	R	P	I	I	T	M	S	M	S	G
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S									.	.	.	.	.	S	S																	T	T		S	S		B						T	G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		149	150	.	.																.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	M	I	G	Q	L	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	V	I	S	R	L	C	G
Template Known Secondary structure		G	G	T
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions