Job Description P0AC13 Confidence 95.95% Date Thu Jan 5 11:16:53 GMT 2012 Rank 67 Aligned Residues 186 % Identity 16% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.		.	.	100	.	.	.
Predicted Secondary structure																																																																		.									.
Query SS confidence																																																																		.									.
Query Sequence		D	S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	.	E	V	W	I	S	V	D	T	.	S	K	P	E	V	I
Query Conservation																																																																		.									.
Alig confidence																																			.	.	.	.	.	.	.	.												.	.	.	.									.									.
Template Conservation																																			.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		E	G	E	Q	F	A	N	A	F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	.	.	.	.	.	.	.	.	S	P	V	A	S	E	Q	S	R	Q	D	.	.	.	.	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A
Template Known Secondary structure		G	G	G	G	S	T	T																			T		S						.	.	.	.	.	.	.	.		G	G	G								.	.	.	.						T	S			S	S								S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.									.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	L	L	S
Template Known Secondary structure							T	T		S								G	G	G																										T	T								T	T	G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.															.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	L	L	V	G	M	S	R	K	S	M	I	G	Q	L	L	N	V	G	P	S	E	R	L	S	G	S	L	A	C	A	V	I	A	A
Query Conservation
Alig confidence													.	.										.																		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.										.																		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	K	A	V	D	K	I	G	V	N	.	.	R	V	G	I	A	D	T	V	G	.	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	.	.	V	S	C	D	I	E	C	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L
Template Known Secondary structure												S	.	.							S	S	S	.																		.	.		S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	S
Template Predicted Secondary structure													.	.										.																		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.															.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		248	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	G	A	H	I	I	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	G	A	T	H	I	D	T
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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