Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC13
Confidence50.81%DateThu Jan 5 11:16:53 GMT 2012
Rank384Aligned Residues115
% Identity17%Templatec3h5dD_
PDB info PDB header:lyaseChain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  GILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTS
Query Conservation 



 








       
   
      







 






  
   

  

 
 
  
     






 
Alig confidence 














.
























...

























.








Template Conservation   
  
  


  

 .

       
  
   

 

   
...



   

 


  
          .   

 

 
Template Sequence  KIITAFITPFHEDGS. INFDAIPALIEHLLAHHTDGILLAG. . . TTAESPTLTHDEELELFAAVQKVVNG. RVPLIAGVG
Template Known Secondary structure 




B
TTSS.B
TTTT

SS...TTTTGGGS
SSS.SS


Template Predicted Secondary structure 












.







...







.


Template SS confidence 















































































   10.........20.... .....30.........40......... 50.........60.........70..... ....80....
 
   99100 .........110 ........ .120...... ...130........
Predicted Secondary structure 
......

.




....



....



Query SS confidence 

. . . . . .









.







. . . .







. . . .











Query Sequence  KP. . . . . . EVIRESAKVG. AHIINDIR. . . . SLSEPGAL. . . . EAAAETGLPVCL
Query Conservation    ...... 
  


  
.  





....
  
    ....   
     


Alig confidence 

......









.







....







....











Template Conservation    
    
  
  
   
     

  
         
  
   

     

 
Template Sequence  TNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIII
Template Known Secondary structure 
SS


S


SS


S
SS
Template Predicted Secondary structure 




















Template SS confidence 






















































   85....90.........100.........110.........120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions