Job Description P0AC13 Confidence 37.35% Date Thu Jan 5 11:16:53 GMT 2012 Rank 455 Aligned Residues 154 % Identity 16% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	.	.	.	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	V	I	R	E	S
Query Conservation																																																											.	.	.
Alig confidence					.																																.	.																					.	.	.
Template Conservation					.																																.	.
Template Sequence		D	T	G	.	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A	A	F	H	I	E	D	Q	V	Q	T	K	.	.	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q	T	H	G	Y	E	E	S
Template Known Secondary structure		T	T		.	S	S	S														T	T									B					.	.		B																					T
Template Predicted Secondary structure					.																																.	.
Template SS confidence
		89	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		107	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		A	K	.	.	.	.	.	.	.	V	G	A	H	I	I	N	D	I	R	S	L	S	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		V	A	R	L	R	A	A	R	D	A	G	A	D	V	G	F	L	E	G	I	T	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	K	E	M	G	F	.	.
Template Known Secondary structure												T		S					T	T														T	T	T	S		B						T	T	S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T		.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.																		.	.	230	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	R	I	I	I	F	P	F	A	A	L	G	P	A	V	A	A	M	R	E	A	M	E	K	L	K	R
Template Known Secondary structure		.	S					T	T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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