Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC13
Confidence85.36%DateThu Jan 5 11:16:53 GMT 2012
Rank182Aligned Residues146
% Identity21%Templatec3exsB_
PDB info PDB header:lyaseChain: B: PDB Molecule:rmpd (hexulose-6-phosphate synthase); PDBTitle: crystal structure of kgpdc from streptococcus mutans in2 complex with d-r5p
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80......... 90.........100.. ......
Predicted Secondary structure 




















.




....
Query SS confidence 























































.












. . . .





Query Sequence  HNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF. EVWISVDTSKPEV. . . . IRESAK
Query Conservation        
   
      







 






  
   

  

 
 
  
    . 






    
....  


 
Alig confidence 













.









............


















.












....





Template Conservation      
  
      .   

 



............       
   
  
        
  
 
  

          
Template Sequence  HSNLKGAITAAVSV. GNEVDVIEAG. . . . . . . . . . . . TVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAV
Template Known Secondary structure 
SS.GGG
S
............
T
SSS
S
T
Template Predicted Secondary structure 


.





............












Template SS confidence 















































































   14.....20....... ..30....... ..40.........50.........60.........70.........80
 
   109110.........120.. .......130.........140.........150.........160.........170.........180.....
Predicted Secondary structure 










...























Query SS confidence 













. . .






























































Query Sequence  VGAHIINDIRSLSE. . . PGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLD
Query Conservation   
  






  
...       
     




  
 
              
    
   
  
   

    



Alig confidence 













...

























.................












.......
Template Conservation   


 



                                  .................          
  .......
Template Sequence  RGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWT. . . . . . . . . . . . . . . . . YDQAQQWLDAGIS. . . . . . .
Template Known Secondary structure  TT
STTS

TTT


SS

.................TT

.......
Template Predicted Secondary structure 


















.................



.......
Template SS confidence 















































































   81........90.........100.........110.........120... ......130......
 
   186...190.........200.........210.......
Predicted Secondary structure 











Query SS confidence 































Query Sequence  PGFGFGKNLSHNYSLLARLAEFHHFNLPLLVG
Query Conservation 




 
       

  
     

 


 
Alig confidence  .






























Template Conservation  .              
            
 
 
Template Sequence  . QAIYHQSRTWGEKDLNKVKKLIEMGFRVSVT
Template Known Secondary structure  .





T
Template Predicted Secondary structure  .











Template SS confidence 































   137..140.........150.........160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions