Job Description P0AC13 Confidence 64.07% Date Thu Jan 5 11:16:53 GMT 2012 Rank 311 Aligned Residues 195 % Identity 17% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	I	L	N	V	T	P	D	S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	D	T
Query Conservation
Alig confidence																		.																									.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																		.																									.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		L	K	K	I	Q	F	F	D	T	T	L	R	D	G	E	N	.	F	D	V	K	E	K	I	Q	I	A	L	Q	L	E	K	L	G	I	D	V	I	E	A	G	.	.	.	.	.	.	.	.	F	P	I	S	S	P	G	D	F	E	C	V	K	A	I	A	K	A	I	.	.	.	K	H	C	S	V	T	G	L	A
Template Known Secondary structure											T	T	T					.																	T		S						.	.	.	.	.	.	.	.		G	G	G																.	.	.		S	S
Template Predicted Secondary structure																		.																									.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.
			98	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.																			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	S	K	P	E	V	I	R	E	S	A	K	V	.	.	.	.	G	A	H	I	I	N	D	I	R	S	L	S	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y
Query Conservation		.													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		R	C	V	E	G	D	I	D	R	A	E	E	A	L	K	D	A	V	S	P	Q	I	H	I	F	L	A	T	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	T	R	S	D	R	.	.	.	.	.	.
Template Known Secondary structure			S	S												T	T		S	S										S							T	T																				T	T		S								T	G	G	G	S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210		.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																						.					.					.
Query SS confidence																																																						.					.					.
Query Sequence		D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	.	F	H	H	F	.	N	L	P	L	.	L	V	G	M	S	R	K	S	M	I	G	Q	L	L	N	V	G
Query Conservation																																																						.					.					.
Alig confidence		.	.	.	.	.	.	.	.																	.	.										.																	.					.					.					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																	.	.										.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	F	L	I	E	A	V	Q	T	A	I	D	A	G	A	T	.	.	V	I	N	I	P	D	T	V	G	.	Y	T	N	P	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.													T	T			.	.							S	S	S	.																			T	T	G	G	G	S							B	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																	.	.										.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	E	R	L	S	G	S	L	A	C	A	V	I	A	A	M	Q	G	A	H	I	I	R	V
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	D	D	L	G	X	A	T	A	N	A	L	A	A	I	E	N	G	A	R	R	V	E	G
Template Known Secondary structure		.	.		T	T	S												T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions