Job Description P0AC13 Confidence 64.30% Date Thu Jan 5 11:16:53 GMT 2012 Rank 309 Aligned Residues 208 % Identity 18% Template c3epmB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:thiamine biosynthesis protein thic; PDBTitle: crystal structure of caulobacter crescentus thic Resolution 2.79 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.											80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.
Predicted Secondary structure																				.																											.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																				.																											.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	.	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	.	.	.	.	.	.	.	.	.	.	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	.	E	V	I
Query Conservation																				.																											.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																				.					.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																									.	.	.	.	.	.	.	.
Template Sequence		T	V	A	D	E	V	D	K	L	V	W	A	T	R	W	G	A	D	T	V	X	D	L	.	.	.	.	.	.	.	.	S	T	G	R	N	I	H	N	I	R	D	W	I	I	R	N	S	S	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G	V	A	E	D	L	N	W	E	V	F	R	D	T	L
Template Known Secondary structure																T	T		S						.	.	.	.	.	.	.	.			S	T	T											T		S	S														T	T	T		G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250									.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																																							.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		I	E	Q	C	E	Q	G	V	D	Y	F	T	I	H	A	G	V	R	L	P	F	I	P	X	T	A	K	R	V	T	G	I	V	S	R	G	G	S	I	X	A	K	W	C	L	A	H	H	K	E	N	F	L	Y	E	R	F	D	E	I	C	E	I	X	R	A	Y	D	V	S	F	S	L	.	.	.	.	G	D	G
Template Known Secondary structure								T								T	T			T	T	T	G	G	G	G	T	T	S	S	S																			S							S									T	T	T	T						.	.	.	.			T
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.					.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.
Predicted Secondary structure																.																											.																													.
Query SS confidence																.																											.																													.
Query Sequence		K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	.	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	.	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	.	L	L	V	G	M	S	R	K	S
Query Conservation																.																											.																													.
Alig confidence																.																			.	.	.						.																						.	.	.	.				.					.	.	.	.	.
Template Conservation																																			.	.	.																												.	.	.	.									.	.	.	.	.
Template Sequence		L	R	P	G	S	T	A	D	A	N	D	E	A	Q	F	S	E	L	R	T	L	G	E	L	T	K	V	A	W	K	H	G	V	.	.	.	Q	V	X	I	E	G	P	G	H	V	A	X	H	K	I	K	A	N	X	D	E	Q	L	K	H	C	H	.	.	.	.	E	A	P	F	Y	T	L	G	.	.	.	.	.
Template Known Secondary structure		T			S	S	G	G	G	T	T																					T	T		.	.	.								S	B			G	G	G												T	T	.	.	.	.	T								.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.																												.	.	.	.									.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.				.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.					.	.	.	.	440	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.													.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	G	Q	L	L	N	V	G	P	S	E	R	L	S	G	S	L	A	C	A	V	I	A	A	M	Q	G	A	H	I	I	.	.	.	.	.	.	.	.	.	.	.	.	R	V	H	D	V	K	E	T	V	E	A	M	R	V	V
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	P	L	T	T	D	I	A	P	G	Y	D	H	I	T	S	A	I	G	A	A	X	I	G	W	F	G	T	A	X	L	C	Y	V	T	P	K	E	H	L	G	L	P	D	R	D	D	V	K	T	G	V	I	T	Y	K	L	A
Template Known Secondary structure		.	.		B	S		S	S		T	T																	T		S							T	T	T	T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions