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Job DescriptionP0AC13
Confidence94.03%DateThu Jan 5 11:16:53 GMT 2012
Rank103Aligned Residues179
% Identity18%Templatec3e02A_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:uncharacterized protein duf849; PDBTitle: crystal structure of a duf849 family protein (bxe_c0271) from2 burkholderia xenovorans lb400 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  NSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHII
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Template Sequence  ITPEEIVKEGVAAAEAGAAXLHLHARDPLNGRPSQDPDL. . . . FXRFLPQLKERTDAILNITTGGG. . . . . . . . . . . . . .
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   28.30.........40.........50.........60...... ...70.........80.........
 
   115....120.........130.........140... ......150 .........160.........170...
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Query Sequence  NDIRSLSEPGALEAAAETGLPVCLMHMQG. NPKTMQE. . . . . . . . . . . . . . . . . . . . APKYDDVFAEVNRYFIEQIARCE
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Template Sequence  . . . LGXSLDERLAPARAARPEVASXNXGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGXT. . . . ELG
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   90.........100.........110.........120.........130.........140.........150......... 160..
 
   174.....180........ .190.........200.........210... ......220.....
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Query Sequence  QAGIAKEKLLLDPGF. . . . . . . . . . . . . . . . . . . . . . . . . . . GFGKNLSHNYSLLARLAEFHHFNLP. LLVGMSRKSMIG
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Template Sequence  ASGTRFEFECYDVGHLYNLAHFVDRKLVEPPFFLQCVFGILGGIGADPENLLHXRTIADRLFGQDYYLSVLAA. . . . . . .
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   163......170.........180.........190.........200.........210.........220.........230.....
 
   226...230.........240.........250......
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Query Sequence  QLLNVGPSERLSGSLACAVIAAMQGAHIIRV
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Template Sequence  . . . . . . . . . . GRHQXPFVTXSAILGGN. VRV
Template Known Secondary structure  ..........GGGTT
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   236...240.........250.. ...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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