Job Description P0AC13 Confidence 70.86% Date Thu Jan 5 11:16:53 GMT 2012 Rank 281 Aligned Residues 153 % Identity 22% Template c3dfyJ_ PDB info PDB header:isomerase Chain: J: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of apo dipeptide epimerase from2 thermotoga maritima Resolution 2.10 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.								.	.	.														.	.
Query SS confidence																																																								.								.	.	.														.	.
Query Sequence		S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	.	E	V	W	I	S	V	D	.	.	.	T	S	K	P	E	V	I	R	E	S	A	K	V	.	.
Query Conservation																																																								.								.	.	.														.	.
Alig confidence																								.	.	.	.	.					.	.	.									.	.	.	.									.								.	.	.														.	.
Template Conservation																								.	.	.	.	.					.	.	.									.	.	.	.
Template Sequence		T	V	E	N	R	V	K	E	A	K	K	I	F	E	E	G	F	R	V	I	K	I	.	.	.	.	.	K	V	G	E	.	.	.	N	L	K	E	D	I	E	A	.	.	.	.	V	E	E	I	A	K	V	T	R	G	A	K	Y	I	V	D	A	N	M	G	Y	T	Q	K	E	A	V	E	F	A	R	A	V	Y
Template Known Secondary structure																T	T							.	.	.	.	.				S	.	.	.									.	.	.	.							T	S	T	T								T	T		S
Template Predicted Secondary structure																								.	.	.	.	.					.	.	.									.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.				.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
				110	.	.			.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure		.	.				.	.											.
Query SS confidence		.	.				.	.											.
Query Sequence		.	.	G	A	H	.	.	I	I	N	D	I	R	S	L	S	E	.	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L
Query Conservation		.	.				.	.											.
Alig confidence		.	.				.	.											.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		Q	K	G	I	D	I	A	V	Y	E	Q	P	V	R	R	E	D	I	E	G	L	K	F	V	R	F	H	S	P	F	P	V	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	S	A	R	T	K	F	D	V	M	R	L	V	K	E	E	A	V	D	.	.	Y	V	N	I
Template Known Secondary structure			T	T				S						S		T	T													S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T		S	S										T	T			S	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240																					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	L	L	V	G	M	S	R	K	S	M	I	G	Q	L	L
Query Conservation
Alig confidence							.				.	.	.	.	.
Template Conservation							.				.	.	.	.	.
Template Sequence		K	L	M	K	S	.	G	I	S	.	.	.	.	.	D	A	L	A	I	V	E	I	A	E	S	S	G	L	K	L	M	I	G	C	M	G	E	S	S	L	G	I	N	Q
Template Known Secondary structure							.				.	.	.	.	.											T	T	T								S	S
Template Predicted Secondary structure							.				.	.	.	.	.
Template SS confidence
		265	.	.	.	.		270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions