Job Description P0AC13 Confidence 74.38% Date Thu Jan 5 11:16:53 GMT 2012 Rank 266 Aligned Residues 145 % Identity 12% Template c3dfhC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of putative mandelate racemase / muconate2 lactonizing enzyme from vibrionales bacterium swat-3 Resolution 2.20 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.									.	.	.													.
Query SS confidence																																																								.	.									.	.	.													.
Query Sequence		S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	.	.	E	V	W	I	S	V	D	T	.	.	.	S	K	P	E	V	I	R	E	S	A	K	V	.
Query Conservation																																																								.	.									.	.	.													.
Alig confidence																									.	.	.	.	.	.	.	.																								.	.									.	.	.													.
Template Conservation																									.	.	.	.	.	.	.	.
Template Sequence		T	M	E	G	I	Y	D	L	V	E	G	F	L	E	K	G	Y	K	H	I	R	C	Q	.	.	.	.	.	.	.	.	L	G	F	D	Q	D	Q	Y	M	D	N	T	L	T	M	F	K	S	L	R	E	K	Y	G	N	Q	F	H	I	L	H	D	V	H	E	R	L	F	P	N	Q	A	I	Q	F	A	K	E	V
Template Known Secondary structure		S														T	T								.	.	.	.	.	.	.	.																								T	T	S	S							T	T		S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
					110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.														.
Query SS confidence		.	.	.														.
Query Sequence		.	.	.	G	A	H	I	I	N	D	I	R	S	L	S	E	.	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D
Query Conservation		.	.	.														.
Alig confidence		.	.	.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		E	Q	Y	K	P	Y	F	I	E	D	I	L	P	P	N	Q	T	E	W	L	D	N	I	R	S	Q	S	S	V	S	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	F	N	N	P	E	E	W	K	S	L	I	A	N	R	R	I	D	.	.	F	I	R	C	H
Template Known Secondary structure		G	G	G			S						S		T	T		G	G	G						T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			S										T	T			S	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.																					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.
		186	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		P	G	F	.	.	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	L	L	V	G
Query Conservation					.	.
Alig confidence					.	.						.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		V	S	Q	I	G	G	I	T	P	A	.	.	.	.	.	.	.	L	K	L	G	H	L	C	Q	N	F	G	V	R	I	A	W	H
Template Known Secondary structure		T	T	T	T	T	S					.	.	.	.	.	.	.											T
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.								.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions