Job Description P0AC13 Confidence 52.44% Date Thu Jan 5 11:16:53 GMT 2012 Rank 377 Aligned Residues 192 % Identity 16% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.
Predicted Secondary structure								.																																																																	.
Query SS confidence								.																																																																	.
Query Sequence		I	L	N	V	T	P	.	D	S	F	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	.	E	V	W	I	S	V	D	T
Query Conservation								.																																																																	.
Alig confidence								.																																								.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	D	S	T	L	R	E	G	E	Q	F	E	K	A	N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	T	T	P	V	A	S	P	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I
Template Known Secondary structure								T	G	G	G	G	S	T	T																			T		S							G	G	G			.	.	.	.	.	.	.	.	.	.	.	.												S			S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.													.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		98		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.												.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure			.																										.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence			.																										.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		S	.	K	P	E	V	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	S	E	P	.	.	.	.	.	.	.	.	.	.	.	G	A	L	E	A	A	A	E	T	G	.	.	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R
Query Conservation			.																										.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence			.																										.	.	.	.	.	.	.	.	.	.	.											.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	C	R	L	D	A	A	K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E
Template Known Secondary structure			S											T	T		S								S																									T	T	S							S	S	T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	L	.	L	V	G	M	S	R	K	S	M	I	G	Q	L	L	N	V	G	P	S	E	R	L	S	G	S	L	A	C
Query Conservation																																																					.
Alig confidence																	.	.												.																							.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.												.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	D	.	.	R	V	G	L	A	D	T	V	G	V	A	.	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	T	G	C	A	I	A	N
Template Known Secondary structure												G	G	G		S	.	.							T	T	S			.																	T	T	T	S							B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																	.	.												.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																.	.	200	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	A	A	M	Q	G	A	H	I	I	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	E	A	I	E	A	G	A	T	H	V	D	T
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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