Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC13
Confidence100.00%DateThu Jan 5 11:16:53 GMT 2012
Rank8Aligned Residues266
% Identity45%Templatec2y5sA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate.
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  LFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV
Query Conservation                





 








       
   
      







 






  
   

  

 
 
Alig confidence 
























..........












































Template Conservation     
        
 





 



..........
 
   
      







  





  
   

  

 


Template Sequence  LQCGRFELTFERPLVMGILNATPAR. . . . . . . . . . DDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLV
Template Known Secondary structure  TT

SS




T..........TTT
SSS

STT




Template Predicted Secondary structure 
















..........














Template SS confidence 















































































   910.........20.........30... ......40.........50.........60.........70........
 
   83......90.........100.........110.........120.........130.........140......... 150.........160.
Predicted Secondary structure 






























.





Query SS confidence 


































































.











Query Sequence  EAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQ. EAPKYDDVFAEV
Query Conservation    
     






    
  


  
  






  
       
     




  
 
    .          
 
Alig confidence 





.



























































.











Template Conservation    
   .   




    
  


  

 






         

     




  
 
           
     
Template Sequence  EALRPL. NVPLSIDTYKPAVMRAALAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDV
Template Known Secondary structure  GGG.
S



T
STTTT
STTSSSS



TTTT




SS
Template Predicted Secondary structure 
.



































Template SS confidence 















































































   8990.... .....100.........110.........120.........130.........140.........150.........160.......
 
   162.......170.........180.........190... ......200.........210 .........220........ .230....
Predicted Secondary structure 











.
.....




.


Query SS confidence 































.
















. . . . .

















.





Query Sequence  NRYFIEQIARCEQAGIAKEKLLLDPGFGFGKN. LSHNYSLLARLAEFHHF. . . . . NLPLLVGMSRKSMIGQLL. NVGPSE
Query Conservation     
   
  
   

    








 
 .      

  
     
.....
 


 
 






   .      
Alig confidence 































.
















.....

















.





Template Conservation         
      

    








 
        

  
           
 


 
 






          
Template Sequence  RDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPLE
Template Known Secondary structure  TT

GGG

TTSSS
TTTGGGGS
B
TTSSB

B
TT
TTTTS

GGG
Template Predicted Secondary structure 


























Template SS confidence 















































































   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   235....240.........250.........260.........270.........
Predicted Secondary structure 











Query SS confidence 












































Query Sequence  RLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKENK
Query Conservation 
   
      
   

 






     
  
  

       
Alig confidence 












































Template Conservation 
   
 
    
   

 






     

 
  

    
 
Template Sequence  RVAASVAAALCAVERGAAIVRVHDVAATVDALSVWNAVRAAARQR
Template Known Secondary structure 
TT
SS
TT
Template Predicted Secondary structure 









Template SS confidence 












































   248.250.........260.........270.........280.........290..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions