Job Description P0AC13 Confidence 83.70% Date Thu Jan 5 11:16:53 GMT 2012 Rank 201 Aligned Residues 148 % Identity 16% Template c2qgqF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:protein tm_1862; PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77 Resolution 2.00 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	V	I	R	E	S	A	K	V	G	A	H
Query Conservation
Alig confidence																																																							.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	R	S	I	E	D	I	T	R	E	V	E	D	L	L	K	E	G	K	K	E	I	I	L	V	A	Q	D	T	T	S	Y	G	I	D	L	Y	R	K	Q	A	L	P	D	L	L	R	R	L	N	S	L	.	.	N	G	E	F	W	I	R	V	X	Y	L	H	P	D	H	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B																T	T									S		G	G	G	T	T	T	T	T	T	S	S												T	S	.	.	S	S	S										G	G	G		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																																											.	.
Query SS confidence																							.	.																																											.	.
Query Sequence		I	I	N	D	I	R	S	L	S	E	P	G	A	L	E	A	A	A	E	T	G	.	.	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	.	.	G	I	A	K	E	K	L	L	L	D	P	G	F
Query Conservation																							.	.																																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.													.	.																												.	.	.	.												.	.			.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																										.	.	.	.																.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	T	E	E	I	I	S	A	X	L	E	L	D	K	V	V	K	Y	F	D	V	P	V	Q	H	G	S	D	K	I	L	K	L	X	G	R	T	K	S	S	E	E	.	.	.	.	L	K	K	X	L	S	S	I	R	E	R	F	P	D	A	.	.	.	V	L	R	T	S	I	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.												T	T	B		S							B		S									T			S					.	.	.	.													T	T		.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																										.	.	.	.																.	.	.
Template SS confidence
											234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.
		189	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	F	.	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		G	F	P	G	E	T	E	E	D	F	E	E	L	K	Q	F	V	E	E	I
Template Known Secondary structure		S		T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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