 |
Job Description | P0AC13 | Confidence | 65.67% | Date | Thu Jan 5 11:16:53 GMT 2012 |
Rank | 304 | Aligned Residues | 96 |
% Identity | 16% | Template | c2oz8B_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: B: PDB Molecule:mll7089 protein; |
PDBTitle: crystal structure of putative mandelate racemase from mesorhizobium2 loti
|
Resolution | 2.48 Å |
|
 |
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
. | . | 100 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | G | T | H | N | S | L | I | D | A | V | K | H | A | N | L | M | I | N | A | G | A | T | I | I | D | V | G | G | E | S | T | R | P | G | A | A | E | V | S | V | E | E | E | L | Q | R | V | I | P | V | V | E | A | I | A | Q | R | F | E | V | W | I | S | V | D | T | . |
. |
S | K | P | E | V | I | R | E | S | A |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
| . | . |   |   |   |   |
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
| . | . | . | . | . | . | . | . |
|
|   |   |   |   |
| . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
D | P | N | E | A | W | T | S | K | E | A | L | T | K | L | V | A | I | R | E | A | G | H | D | L | L | W | V | E | . |
. |
. |
. |
. |
. |
. |
. |
D | P | I | L | R | H | D | . |
. |
. |
. |
. |
H | D | G | L | R | T | L | R | H | A | V | T | W | T | Q | I | N | S | G | E | Y | L | D | L | Q | G | K | R | L | L | L |
Template Known Secondary structure |   |
 |
| T | T |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | S |
| B |
| T | T |
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
| S | S |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | |
|
|
|
|
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
  |
  |   |
108 | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
| . |
|
|  |  |  |
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | G | . |
A | H | I | I | N | D | I | R | S | L | S | E | . |
P | G | A | L | E | A | A | A | E | T | G | L | P | V | C | L |
Query Conservation |   |
  |   |
| . |   |   |
|
|
|
|
|
|
|   |   |
| . |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
Template Sequence |   |
E | A | H | A | A | D | I | L | N | V | H | G | Q | V | T | D | V | M | R | I | G | W | L | A | A | E | L | G | I | P | I | S | I |
Template Known Secondary structure |   |
 | T | T |
|
| S |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
261 | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|