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Job DescriptionP0AC13
Confidence88.09%DateThu Jan 5 11:16:53 GMT 2012
Rank163Aligned Residues152
% Identity15%Templatec2ejaB_
PDB info PDB header:lyaseChain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 aquifex aeolicus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80......... 90.........100.........110.
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Query Sequence  LIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF. . . . . EVWISVDTSKPEVIRESAKVGA
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Template Sequence  TETVLAYLKEQIKAGADVVQIF. . . . DSWVNNLSLEDYGEYVYPYVNYLISELKDFSDTPVIYFFRGSSSFIDLAVDYRA
Template Known Secondary structure  TT
S....TTGGGS
T

S
SSTTS

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   178.180.........190......... 200.........210.........220.........230.........240.........250...
 
   112.......120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  HIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGF.
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Template Sequence  DALSV. . . DWSVDIPELFKIYDK. . GFQ. . GNLEPAVLYASE. . . . . . . . . EVIEEKTLGLLRRIPVKTRYVFNLGHGLA
Template Known Secondary structure  S
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TTS

SS..
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B
GGGGGS
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SSSB
BSS


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   254.... .260.........270... ... ...280........ .290.........300.........310.......
 
   191........200........
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Query Sequence  . GKNLSHNYSLLARLAEFH
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Template Sequence  PDMELEKVKYLVDLVKSFP
Template Known Secondary structure  TTS
T

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   318.320.........330......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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