Job Description P0AC13 Confidence 79.47% Date Thu Jan 5 11:16:53 GMT 2012 Rank 231 Aligned Residues 189 % Identity 17% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	V	I	R	E	S	A	K	V	G	A
Query Conservation
Alig confidence																														.									.	.	.	.	.
Template Conservation																														.									.	.	.	.	.
Template Sequence		K	R	F	V	P	T	A	D	K	I	A	L	I	N	R	L	S	D	C	G	Y	A	R	I	E	A	T	S	.	F	V	S	P	K	W	V	P	.	.	.	.	.	Q	L	A	D	S	R	E	V	X	A	G	I	R	R	A	D	G	V	R	Y	S	V	L	V	P	N	X	K	G	Y	E	A	A	A	A	A	H	A
Template Known Secondary structure		S	S															T	T	T	T		S							.		S		T	T	T		G	.	.	.	.	.	G	G	T	T								S				S	S	S							S	S										T	T
Template Predicted Secondary structure																														.									.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.																			.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		H	I	I	N	D	I	R	S	L	S	E	P	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	A	A	A	E	T	G	L	P	V	C	.	.	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	P	V	T	P	Q	.	.	.	.	.	.	.	.	.	.	A	V	A	S	V	T	E	Q
Template Known Secondary structure		S								S									T	S	S																			T	T										S	S			T	T	T							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.											.	.	.	.	160	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.					.
Query SS confidence																																									.					.
Query Sequence		C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	.	N	L	P	L	.	L	V	G	M	S	R	K	S	M	I	G	Q	L	L	N	V	G	P	S	E	R	L	S	G	S	L	A	C	A	V	I	A	A	M	Q
Query Conservation																																									.					.
Alig confidence									.	.											.																.	.			.					.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.											.																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	S	L	G	C	H	.	.	E	V	S	L	G	D	T	I	G	R	.	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	.	.	I	A	P	A	H	S	L	A	G	H	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	G	G	R	A	L	D	N	I	R	V	S	L	E	K
Template Known Secondary structure						T		S	.	.							T	T	S		.															T	.	.	T	S		G	G	G						B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure									.	.											.																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.																.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	H	I	I	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	R	V	F	D	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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