Job Description P0AC13 Confidence 77.55% Date Thu Jan 5 11:16:53 GMT 2012 Rank 247 Aligned Residues 206 % Identity 17% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		6	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.												.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure										.																							.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																							.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	T	S	L	D	L	S	.	H	P	H	V	M	G	I	L	N	V	T	P	D	S	F	S	D	G	G	T	H	N	.	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	.	.	.	.	.	.	.	.	.	.	.	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E
Query Conservation										.																							.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.												.	.	.	.	.	.	.	.	.			.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		G	N	R	S	V	G	Y	N	H	E	P	L	I	I	C	E	I	G	I	N	.	.	.	.	.	.	.	.	.	H	E	G	S	L	K	T	A	F	E	M	V	D	A	A	Y	N	A	G	A	E	V	V	K	H	Q	T	H	I	V	E	D	E	M	S	D	E	A	K	Q	V	I	P	G	N	A	D	V	S	I	Y
Template Known Secondary structure		T	T					T	T	S										T	T	.	.	.	.	.	.	.	.	.	T	T	T																T		S															G	G	G	G	G				T	T		S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.										30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		73	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																											.
Query SS confidence								.	.	.	.	.	.																																											.
Query Sequence		E	E	L	Q	R	V	.	.	.	.	.	.	I	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	V	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	.	S	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P
Query Conservation								.	.	.	.	.	.																																											.
Alig confidence								.	.	.	.	.	.																																											.																									.
Template Conservation																																																																																	.
Template Sequence		E	I	M	E	R	C	A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F	S	R	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G	M	N	S	.
Template Known Secondary structure																								T	T									S											T		S						G	G	G	T	T										T	T		S							T	T			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	.	L	L	V	G	M	S	R	K	S	M	I
Query Conservation																																																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																				.	.										.				.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																				.	.										.															.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	.	.	P	Y	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	V	R	.	.	L	G	G	M	N	D	L	S	E	.	A	F	P	D	A	I	I	G	L	S	D	H	T	L	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T		.	.											S	S								.	.	T	T								.			T	T	S								S	S	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																				.	.										.															.
Template SS confidence
																		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	L	L	N	V	G	P	S	E	R	L	S	G	S	L	A	C	A	V	I	A	A	M	Q	G	A	H	I	I	R	V	H
Query Conservation
Alig confidence		.	.	.	.		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	D	.	.	.	.	.	.	.	.	.	.	N	Y	A	C	L	G	A	V	A	L	G	G	S	I	L	E	R	H
Template Known Secondary structure		.	.	.	.	S	.	.	.	.	.	.	.	.	.	.	S										T
Template Predicted Secondary structure		.	.	.	.		.	.	.	.	.	.	.	.	.	.
Template SS confidence
						218											.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions