Job Description P60438 Confidence 100.00% Date Thu Jan 5 12:06:48 GMT 2012 Rank 5 Aligned Residues 208 % Identity 26% Template d1vqob1 SCOP info Reductase/isomerase/elongation factor common domain Translation proteins Ribosomal protein L3 Resolution 2.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20											.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Query Sequence		M	I	G	L	V	G	K	K	V	G	M	T	R	I	F	T	E	D	G	V	.	.	.	.	.	.	.	.	.	.	S	I	P	V	T	V	I	E	V	E	A	N	R	V	T	Q	V	K	D	L	A	N	D	G	Y	R	A	I	Q	V	T	.	.	.	.	.	.	T	G	A	K	K	A	N	R	V	T	K	P	E
Query Conservation																						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	G	F	A	G	Y	K	A	G	M	T	H	V	V	L	V	N	D	E	P	N	S	P	R	E	G	M	E	E	T	V	P	V	T	V	I	E	T	P	P	M	R	A	V	A	L	R	A	Y	E	D	T	P	Y	G	Q	R	P	L	T	E	V	W	T	D	E	F	H	S	E	L	D	R	T	L	D	V	P	E
Template Known Secondary structure																						T	T	S	T	T	T	T	S																										T	T											S				T	T	G	G	G	T	S				S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		65	.	.	.	.	70																														.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.											.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.											.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.											.
Query Sequence		A	G	H	F	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	V	E	A	G	R	G	L	W	E	F	R	L	A	E	G	E	.	.	.	.	.	.	.	.	.	.	E	F	T	V	G	Q	S	I	S	V	.	E	L	F	A	D	V
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.											.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		D	H	D	P	D	A	A	E	E	Q	I	R	D	A	H	E	A	G	D	L	G	D	L	R	L	I	T	H	T	V	P	D	A	V	P	S	V	P	K	K	K	P	D	V	M	E	T	R	V	G	G	G	S	V	S	D	R	L	D	H	A	L	D	I	V	E	D	G	G	E	H	A	M	N	D	I	F	R	A	G
Template Known Secondary structure		S																	T													G	G	G		T	T	S				S										S	S																T					G	G	G	T			T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	V	D	V	T	G	T	S	K	G	K	G	F	A	G	T	V	K	R	W	N	F	R	T	Q	D	A	T	H	G	N	S	L	S	H	R	V	P	G	S	I	G	Q	N	Q	T	P	G	K	V	F	K	G	K	K	M	A	G	Q	M	G	N	E	R	V	T	V	Q	S	L	D	V	V	R	V	D	A	E	R
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		E	Y	A	D	V	A	G	V	T	K	G	K	G	T	Q	G	P	V	K	R	W	G	V	Q	K	R	K	G	K	H	A	R	Q	G	W	R	R	R	I	G	N	L	G	P	.	W	N	P	S	R	V	R	S	T	V	P	Q	Q	G	Q	T	G	Y	H	Q	R	T	E	L	N	K	R	L	I	D	I	G	E	G	D
Template Known Secondary structure																													G	G	G	G	S	S	S		S	S			S		S			.	S	S	S	S	S			T	T	S							S																		S
Template Predicted Secondary structure																																														.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		185	.																	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	V	K	G	A	V	P	G	A	T	G	S	D	L	I	V	K	P	A	V	K	A
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	T	V	D	G	G	F	V	N	Y	G	E	V	D	G	P	Y	T	L	V	K	G	S	V	P	G	P	D	K	R	L	V	R	F	R	P	A	V	R	P
Template Known Secondary structure		T	T			T	T		B	T	T	T	B											S			S	S		T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions