Return to main results Retrieve Phyre Job Id

Job DescriptionP60438
Confidence7.11%DateThu Jan 5 12:06:48 GMT 2012
Rank57Aligned Residues33
% Identity33%Templated1ikna2
SCOP infoCommon fold of diphtheria toxin/transcription factors/cytochrome f p53-like transcription factors Rel/Dorsal transcription factors, DNA-binding domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141..... ...150.... .....160.........170...
Predicted Secondary structure 


.







.













Query SS confidence 





.







.


















Query Sequence  RVPGSI. GQNQTPGK. VFKGKKMAGQMGNERVTVQ
Query Conservation 
  


.
    


.
  





 

    
  
Alig confidence 





.







.


















Template Conservation   
 


 
  
    

 


 
 

 


 
 

Template Sequence  RSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS
Template Known Secondary structure  S
S



BTT

SS




S

SS
Template Predicted Secondary structure 





















Template SS confidence 


































   41........50.........60.........70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions