Job Description P60438 Confidence 100.00% Date Thu Jan 5 12:06:48 GMT 2012 Rank 11 Aligned Residues 152 % Identity 46% Template c3bboF_ PDB info PDB header:ribosome Chain: F: PDB Molecule:ribosomal protein l3; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome Resolution 9.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		K	A	N	R	V	T	K	P	E	A	G	H	F	A	K	A	G	V	E	A	G	R	G	L	W	E	F	R	L	A	E	G	E	E	F	T	V	G	Q	S	I	S	V	.	E	L	F	A	D	V	K	K	V	D	V	T	G	T	S	K	G	K	G	F	A	G	T	V	K	R	W	N	F	R	T	Q	D	A	T	H
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		R	D	R	K	L	T	K	P	E	M	G	H	L	E	K	S	G	I	I	P	L	R	H	L	Q	E	F	R	L	Q	S	I	D	G	F	E	V	T	Q	K	L	D	F	G	E	L	F	K	E	G	D	L	V	D	V	S	G	T	T	I	G	K	G	F	Q	G	G	I	K	R	H	N	F	K	R	G	Q	M	T	H
Template Known Secondary structure				S	S							T	T		S	S						S	S							S					T	T	T	T					S	S		S	S	S		S	S	S							B					S	S			S	S	S	S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	L	S	H	R	V	P	G	S	I	G	Q	N	Q	T	P	G	K	V	F	K	G	K	K	M	A	G	Q	M	G	N	E	R	V	T	V	Q	S	L	D	V	V	R	V	D	A	E	R	N	L	L	L	V	K	G	A	V	P	G	A	T	G	S	D	L	I	V	K	P	A	V	K
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		G	.	S	K	S	H	R	Q	L	G	S	I	G	A	G	T	T	P	G	R	V	Y	K	G	K	K	M	P	G	R	M	G	G	T	K	R	K	I	R	K	L	K	I	V	K	I	D	D	Q	L	N	I	I	M	I	K	G	A	L	P	G	K	P	G	N	L	L	R	I	A	P	A	K	I
Template Known Secondary structure			.	S	S	T	T	T	S					S		S	S			T	T	T	T	T	T	S										B													T	T	T	T						S			S	S		S	S	S
Template Predicted Secondary structure			.
Template SS confidence
		179		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions