Job Description P12281 Confidence 91.17% Date Thu Jan 5 11:33:06 GMT 2012 Rank 40 Aligned Residues 143 % Identity 17% Template d1yq9a1 SCOP info HydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit Resolution 2.35

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		175	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																												.
Query SS confidence											.	.	.	.																																												.
Query Sequence		I	R	K	V	R	V	A	L	F	.	.	.	.	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	.	R	D	D	P	H	A	L	R	A	A	F	I	E	A	D	S	Q	A	D	V	V	I	S
Query Conservation											.	.	.	.																																												.
Alig confidence											.	.	.	.								.	.	.	.	.	.	.	.	.	.																	.										.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		K	K	R	P	S	V	V	Y	L	H	N	A	E	C	T	G	C	S	E	S	.	.	.	.	.	.	.	.	.	.	V	L	R	T	V	D	P	Y	V	D	E	L	I	L	D	V	.	I	S	M	D	Y	H	E	T	L	M	A	G	A	G	H	A	V	E	E	A	L	H	E	A	I	K	G	D	F	V	C	V	I
Template Known Secondary structure				S									B			S						.	.	.	.	.	.	.	.	.	.			T		T	T	T	T								T	.							T	T	T		S	S		T											T	T	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		250	.	.	.	.	.	.	.	.													.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		S	G	G	V	S	V	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	.	.	.	.	.	.	.	F	W	K	L	A	I	K	P	G	K	P	F	A	F	G	K	L	.	.	.	.	.	.	S	N	S	W	F	C	G	L	P	G	N	P	V	S	A
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	G	I	P	M	G	D	G	G	Y	W	G	K	V	G	G	R	N	M	Y	D	I	C	A	E	V	A	P	K	A	K	A	V	I	A	I	G	T	C	A	T	Y	G	G	V	Q	A	A	K	P	N	P	T	G	T	V	G	V	N	E	A	L	G	K	L	G	V	K	A	I	N	I	A	G	C	P	P	N	P
Template Known Secondary structure			S	B				G	G	G	S	T	T	S			T	T											G	G	G	S	S														G	G	G	S	T	T		T	T										G	G	G	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	F	Y	Q	L	V	Q	P	L	L	A	K	L	S	G	N	T	A	S	G	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	N	F	V	G	T	V	V	H	L	L	T	K	G	M	P	E	L	D	K	Q	G	R	P
Template Known Secondary structure														T		S			B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions