Job Description P12281 Confidence 26.74% Date Thu Jan 5 11:33:06 GMT 2012 Rank 363 Aligned Residues 88 % Identity 17% Template d1tjya_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 1.30

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		R	K	V	R	V	A	L	F	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	F	I	E	A	D	S	Q	.	A	D	V	V	I	S	S	G	G	V	S
Query Conservation																																																																						.
Alig confidence											.	.	.	.	.	.	.	.	.	.																																																		.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	E	R	I	A	F	I	P	.	.	.	.	.	.	.	.	.	.	K	L	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	E	A	G	K	A	L	G	I	D	V	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	V	N	N	F	V	N	Q	G	Y	D	A	I	I	V	S	A	V	S	P
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	S	S	S	S	S																		T									S	S																T	T		S							S	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.											.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	E	A	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	L	C	P	A	L	K	R	A	M	Q	R	G	V	K	I	L	T
Template Known Secondary structure		S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions