 |
Job Description | P12281 | Confidence | 20.21% | Date | Thu Jan 5 11:33:06 GMT 2012 |
Rank | 422 | Aligned Residues | 59 |
% Identity | 19% | Template | d1qf6a1 |
SCOP info | Anticodon-binding domain-like
| Class II aaRS ABD-related
| Anticodon-binding domain of Class II aaRS
|
Resolution | 2.90 |
|
 |
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
. | . | . | . | . | . | . | 250 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | K | V | R | V | A | L | F | S | T | G | D | E | L | Q | L | P | G | Q | P | L | G | D | G | Q | I | Y | D | T | N | R | L | A | V | H | L | M | L | E | Q | L | G | C | E | V | I | N | L | G | I | I | R | D | D | P | H | A | L | R | A | A | F | I | E | A | D | S | . |
Q | A | D | V | V | I | S | S | G |
Query Conservation |   |
  |   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   | . |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   | . | . | . | . |
|   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|
Template Sequence |   |
A | P | V | Q | V | V | I | M | N | I | T | D | S | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | E | Y | V | N | E | L | T | Q | K | L | S | N | A | G | I | R | V | K | A | . |
. |
. |
. |
D | L | R | N | E | K | I | G | F | K | I | R | E | H | T | L | R | R | V | P | Y | M | L | V | C | G |
Template Known Secondary structure |   |
| S | S |
|  |  |  |  |  | S | S |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  | . | . | . | . |  |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
538 | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | |
|
|
|
. | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|