Job Description P12281 Confidence 49.27% Date Thu Jan 5 11:33:06 GMT 2012 Rank 216 Aligned Residues 107 % Identity 16% Template d1gv0a1 SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like Resolution 2.5

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	V	A	L	F	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	.	.	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	F	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	I	T	V	I	G	A	G	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	T	A	F	R	L	A	E	K	Q	L	A	R	E	L	V	L	L	D	V	V	E	G	I	P	Q	G	K	A	L	D	M	Y	E	S	G	P	V	G	L	F	D	T	K	V	T	G	S	N	D
Template Known Secondary structure										S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T			S							S	S	S	S											T	T					T									S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.																		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure		.	.																						.	.	.	.	.	.	.
Query SS confidence		.	.																						.	.	.	.	.	.	.
Query Sequence		.	.	A	D	S	Q	A	D	V	V	I	S	S	G	G	V	S	V	G	E	A	D	Y	.	.	.	.	.	.	.	T	K	T	I	L	E	E	L	G	E	I	A	F	W	K	L	A	I	K	P	G	K	P	F	A	F	G	K	L	S	N	S	W	F	C	G	L	P	G	N	P	V	S	A	T	L	T	F	Y	Q
Query Conservation		.	.																						.	.	.	.	.	.	.
Alig confidence		.	.																						.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		Y	A	D	T	A	N	S	D	I	V	V	I	T	A	G	L	P	R	K	P	G	M	T	L	S	M	N	A	G	I	V	R	E	V	T	G	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	H	S	K	N	P	I	I	V	V	V	S	N	P	L	D	I	M	T	.	.	.	.
Template Known Secondary structure		G	G	G	G		S		S							S					T	T																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T		S	S							S	S	S						.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	Q	P	L	L	A	K	L	S	G	N	T	A	S	G
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	H	V	A	W	Q	K	S	G	L	P	K	E	R
Template Known Secondary structure		.	.	.								T			G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					126	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions