Job Description P12281 Confidence 69.89% Date Thu Jan 5 11:33:06 GMT 2012 Rank 124 Aligned Residues 126 % Identity 17% Template d1e3da_ SCOP info HydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit Resolution 1.8

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		177	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																																																												.	.	.
Query SS confidence									.	.	.	.																																																												.	.	.
Query Sequence		K	V	R	V	A	L	F	.	.	.	.	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	F	I	E	A	D	S	.	.	.	Q	A	D	V	V	I	S
Query Conservation									.	.	.	.																																																												.	.	.
Alig confidence									.	.	.	.								.	.	.	.	.	.	.	.	.	.																	.																										.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		R	P	S	V	V	Y	L	H	A	A	E	C	T	G	C	S	E	A	.	.	.	.	.	.	.	.	.	.	L	L	R	T	Y	Q	P	F	I	D	T	L	I	L	D	T	.	I	S	L	D	Y	H	E	T	I	M	A	A	A	G	E	A	A	E	E	A	L	Q	A	A	V	N	G	P	D	G	F	I	C	L	V
Template Known Secondary structure										S	B			S						.	.	.	.	.	.	.	.	.	.			T		B	T	T	B							T	T	.							T	T	T		S															T		S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		250	.	.	.	.	.	.	.	.													.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290							.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		S	G	G	V	S	V	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	.	.	.	.	.	.	.	F	W	K	L	A	I	K	P	G	K	P	F	A	F	G	K	L	S	.	.	.	.	.	.	N	S	W	F	C	G	L	P	G	N	P	V	S	A
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																			.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	A	I	P	T	G	M	D	N	K	Y	G	Y	I	A	G	H	T	M	Y	D	I	C	K	N	I	L	P	K	A	K	A	V	V	S	I	G	T	C	A	C	Y	G	G	I	Q	A	A	K	P	N	P	T	A	A	K	G	I	N	D	C	Y	A	D	L	G	V	K	A	I	N	V	P	G	C	P	P	N	P
Template Known Secondary structure			S	B				T	G	G	G	T	T				T	T											G	G	G	S	S						S							G	G	G	G	S	T	T		T	T										G	G	G	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		305	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	F	Y	Q	L	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	M	V	G	T	L	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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