Job Description P12281 Confidence 77.78% Date Thu Jan 5 11:33:06 GMT 2012 Rank 83 Aligned Residues 130 % Identity 14% Template d1cc1s_ SCOP info HydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit Resolution 2.15

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		176	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																													.	.	.	.
Query SS confidence										.	.	.	.																																													.	.	.	.
Query Sequence		R	K	V	R	V	A	L	F	.	.	.	.	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	R	.	.	.	.	D	D	P	H	A	L	R	A	A	F	I	E	A	D	S	Q	A	D	V	V
Query Conservation										.	.	.	.																																													.	.	.	.
Alig confidence										.	.	.	.								.	.	.	.	.	.	.	.	.	.																	.											.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		K	K	A	P	V	I	W	V	Q	G	Q	G	C	T	G	C	S	V	S	.	.	.	.	.	.	.	.	.	.	L	L	N	A	V	H	P	R	I	K	E	I	L	L	D	V	.	I	S	L	E	F	H	P	T	V	M	A	S	E	G	E	M	A	L	A	H	M	Y	E	I	A	E	K	F	N	G	N	F	F	L
Template Known Secondary structure											S	B			S						.	.	.	.	.	.	.	.	.	.			T		B	T	T	B								T	.							T	T	T		S																	T	T	T	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.											.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.																				.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.									.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		I	S	S	G	G	V	S	V	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	.	.	.	.	.	.	.	F	W	K	L	A	I	K	P	G	K	P	F	A	F	G	K	L	S	N	.	.	.	.	.	.	.	.	S	W
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	E	G	A	I	P	T	A	K	E	G	R	Y	C	I	V	G	E	A	K	A	H	H	H	E	V	T	M	M	E	L	I	R	D	L	A	P	K	S	L	A	T	V	A	V	G	T	C	S	A	Y	G	G	I	P	A	A	E	G	N	V	T	G	S	K	S	V	R	D	F	F	A	D	E	K	I	E	K	L
Template Known Secondary structure					S	B				G	G	G	G	T	T								S	S	S													G	G	G	S	S						S							T	G	G	G	S	T	T			S													T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	G	L	P	G	N	P	V	S	A	T	L	T	F	Y	Q	L	V	Q	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	N	V	P	G	C	P	P	H	P	D	W	M	V	G	T	L	V	A	A	W	S
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions