Job Description P12281 Confidence 87.72% Date Thu Jan 5 11:33:06 GMT 2012 Rank 54 Aligned Residues 130 % Identity 10% Template c3rgwS_ PDB info PDB header:oxidoreductase/oxidoreductase Chain: S: PDB Molecule:membrane-bound hydrogenase (nife) small subunit hoxk; PDBTitle: crystal structure at 1.5 a resolution of an h2-reduced, o2-tolerant2 hydrogenase from ralstonia eutropha unmasks a novel iron-sulfur3 cluster Resolution 1.50 Å

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		176	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																															.	.	.	.
Query SS confidence										.	.	.	.																																															.	.	.	.
Query Sequence		R	K	V	R	V	A	L	F	.	.	.	.	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	R	D	D	.	.	.	.	P	H	A	L	R	A	A	F	I	E	A	D	S	Q	A	D	V	V
Query Conservation										.	.	.	.																																															.	.	.	.
Alig confidence										.	.	.	.								.	.	.	.	.	.	.	.	.	.																	.													.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		P	R	T	P	V	L	W	L	H	G	L	E	C	T	C	C	S	E	S	.	.	.	.	.	.	.	.	.	.	F	I	R	S	A	H	P	L	A	K	D	V	V	L	S	M	.	I	S	L	D	Y	D	D	T	L	M	A	A	A	G	H	Q	A	E	A	I	L	E	E	I	M	T	K	Y	K	G	N	Y	I	L
Template Known Secondary structure												B			S						.	.	.	.	.	.	.	.	.	.		T	T		B	T	T	B								T	.							T	T	T		S																	T	T	T		S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		248	.	250	.	.	.	.	.	.	.	.													.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		I	S	S	G	G	V	S	V	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	.	.	.	.	.	.	.	F	W	K	L	A	I	K	P	G	K	P	F	A	F	G	K	L	.	.	.	.	S	N	S	W	F	C	G	L	P	G	N	P	V	S	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		A	V	E	G	N	P	P	L	N	Q	D	G	M	S	C	I	I	G	G	R	P	F	I	E	Q	L	K	Y	V	A	K	D	A	K	A	I	I	S	W	G	S	C	A	S	W	G	C	V	Q	A	A	K	P	N	P	T	Q	A	T	P	V	H	K	V	I	T	D	K	P	I	I	K	V	P	G	C	P	P	I	A
Template Known Secondary structure					S	B		B		S	G	G	G	T	T	S			T	T												T	T		S											T		T	G	G	G	S	T	T		T	T		B			G	G	G	T			S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	F	Y	Q	L	V	Q	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	M	T	G	V	I	T	Y	M	L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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