Job Description P12281 Confidence 86.63% Date Thu Jan 5 11:33:06 GMT 2012 Rank 57 Aligned Residues 127 % Identity 19% Template c3p2yA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alanine dehydrogenase/pyridine nucleotide transhydrogenase; PDBTitle: crystal structure of alanine dehydrogenase/pyridine nucleotide2 transhydrogenase from mycobacterium smegmatis Resolution 1.82 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.																				.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	R	V	A	L	F	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.
Template Sequence		K	P	A	S	A	L	V	L	G	V	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	.	.	.	.	G	L	Q	A	L	A	T	A	K	R	L	G	A	K	T	T	G	Y	D	V	R	P	E	V	A	E	Q	V	R	S	V	G	A	Q	W	L	D	L	G	S	E	A	E	R	A	Q	Q	Q	Q	A
Template Known Secondary structure										S		S		.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.												T								S	S	G	G	G							T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.														.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.							.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300					.	.	.
Predicted Secondary structure																				.	.																.													.	.	.	.	.	.																				.	.	.	.
Query SS confidence																				.	.																.													.	.	.	.	.	.																				.	.	.	.
Query Sequence		F	I	E	A	D	S	Q	A	D	V	V	I	S	S	G	G	V	S	.	.	V	G	E	A	D	Y	T	K	T	I	L	E	E	L	G	.	E	I	A	F	W	K	L	A	I	K	P	G	.	.	.	.	.	.	K	P	F	A	F	G	K	L	S	N	S	W	F	C	G	L	P	G	N	.	.	.	.	P	V	S
Query Conservation																				.	.																.													.	.	.	.	.	.																				.	.	.	.
Alig confidence																				.	.																.													.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		L	E	D	A	I	T	K	F	D	I	V	I	T	T	A	L	V	P	G	R	P	A	P	R	L	V	T	A	A	A	A	T	G	M	Q	P	G	S	V	V	V	D	L	A	G	E	T	G	G	N	C	E	L	T	E	P	G	R	T	I	V	H	H	G	V	T	I	T	S	P	L	N	L	P	A	T	M	P	E	H
Template Known Secondary structure							T	T		S									T	T	S						B							T	S		T	T						T	T	G	G	G	T		S	B	T	T			T	T						T	T							S		T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	L	T	F	Y	Q	L	V	Q	P	L	L	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	E	L	Y	A	K	N	V	T	A	L	L	D	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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