Job Description P12281 Confidence 89.58% Date Thu Jan 5 11:33:06 GMT 2012 Rank 47 Aligned Residues 130 % Identity 20% Template c3myrE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:hydrogenase (nife) small subunit hyda; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state Resolution 2.10 Å

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		176	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																												.																	.	.	.
Query SS confidence										.	.	.	.																																												.																	.	.	.
Query Sequence		R	K	V	R	V	A	L	F	.	.	.	.	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	.	R	D	D	P	H	A	L	R	A	A	F	I	E	A	D	S	.	.	.	Q	A	D	V	V
Query Conservation										.	.	.	.																																												.																	.	.	.
Alig confidence										.	.	.	.								.	.	.	.	.	.	.	.	.	.																	.										.																	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		R	R	P	S	V	I	W	L	S	F	Q	E	C	T	G	C	T	E	S	.	.	.	.	.	.	.	.	.	.	L	T	R	A	H	A	P	T	L	E	D	L	I	L	D	F	.	I	S	L	D	Y	H	H	T	L	Q	A	A	S	G	E	A	A	E	A	A	R	L	Q	A	M	D	E	N	R	G	Q	Y	L	V
Template Known Secondary structure			S									B			S						.	.	.	.	.	.	.	.	.	.						S	S									T	.							T	T	T		S	S																T	T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.											.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		248	.	250	.	.	.	.	.	.	.	.														.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		I	S	S	G	G	V	S	V	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	.	.	.	.	.	.	.	F	W	K	L	A	I	K	P	G	K	P	F	A	F	G	K	L	.	.	.	.	S	N	S	W	F	C	G	L	P	G	N	P	V	S
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		I	V	D	G	S	I	P	G	P	D	A	N	P	G	F	S	T	V	A	G	H	S	N	Y	S	I	L	M	E	T	V	E	H	A	A	A	V	I	A	V	G	T	C	A	A	F	G	G	L	P	Q	A	R	P	N	P	T	G	A	M	S	V	M	D	L	V	R	D	K	P	V	I	N	V	P	G	C	P	P	I
Template Known Secondary structure					S	B				T	T	S		G	G	G	S			T	T												T	T		S													T	G	G	G	S	T	T		T	T											S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	L	T	F	Y	Q	L	V	Q	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	V	I	T	G	V	I	A	H	Y	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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