Return to main results Retrieve Phyre Job Id

Job DescriptionP12281
Confidence80.33%DateThu Jan 5 11:33:06 GMT 2012
Rank76Aligned Residues92
% Identity17%Templatec3melC_
PDB info PDB header:structural genomics, unknown functionChain: C: PDB Molecule:thiamin pyrophosphokinase family protein; PDBTitle: crystal structure of thiamin pyrophosphokinase family protein from2 enterococcus faecalis, northeast structural genomics consortium3 target efr150
Resolution2.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   202.......210.........220.........230.........240.. .......250.........260.........270.........
Predicted Secondary structure 






..














Query SS confidence 








































. .




































Query Sequence  YDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADS. . QADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIK
Query Conservation   



  
 
 
   
  
     
 

   
   
  
  ..  







 
 
  
     
  

 
 
  
   
Alig confidence 





























.









..












.









....








Template Conservation 



                  
 


 

. 
 

  
        
 
 

 

.
 

 



 .... 
       
Template Sequence  FDSLSREEYHFVQETTETLIQAPAEKDDTD. TQLALQEALQRFPQAEXTIIGATGG. RIDHLLANLW. . . . LPFEPRFQG
Template Known Secondary structure 
TTS

S

SS
SS
.
TT
S
SSS.
T....GGGST
Template Predicted Secondary structure 















.








.
....

Template SS confidence 















































































   50.........60.........70......... 80.........90.........100.... .....110.... .....120...
 
   280.........290.........
Predicted Secondary structure 








Query SS confidence 



















Query Sequence  PGKPFAFGKLSNSWFCGLPG
Query Conservation 



          
  


Alig confidence 



















Template Conservation      
 
         
  
Template Sequence  VLRQIRLCDRQNSIQYYAPG
Template Known Secondary structure  TTTTTT
S
Template Predicted Secondary structure 









Template SS confidence 



















   124.....130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions