Job Description P12281 Confidence 72.59% Date Thu Jan 5 11:33:06 GMT 2012 Rank 104 Aligned Residues 88 % Identity 19% Template c3lm8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine pyrophosphokinase; PDBTitle: crystal structure of thiamine pyrophosphokinase from2 bacillus subtilis, northeast structural genomics consortium3 target sr677 Resolution 2.60 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	F	I	E	A	D	S	Q	.	A	D	V	V	I	S	S	G	G	V	S	V	G	E	A	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	F	W	K	L	A	I	K	P
Query Conservation																																												.
Alig confidence																									.	.	.																	.												.																	.	.	.	.	.	.
Template Conservation																									.	.	.																													.																	.	.	.	.	.	.
Template Sequence		F	D	S	I	T	E	Q	E	R	R	R	I	E	K	A	A	P	A	L	H	V	Y	Q	.	.	.	A	D	Q	T	D	L	D	L	A	L	D	W	A	L	E	K	Q	P	D	I	I	Q	I	F	G	I	T	G	.	G	R	A	D	H	F	L	G	N	I	Q	L	L	Y	K	G	.	.	.	.	.	.	V	K	T
Template Known Secondary structure		S	T	T														T	T						.	.	.																T			S						S				.	S																.	.	.	.	.	.		T	T
Template Predicted Secondary structure																									.	.	.																													.																	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	P	F	A	F	G	K	L	S	N	S	W	F	C	G	L	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	K	I	R	L	I	D	K	Q	N	H	I	Q	X	F	P	P	G
Template Known Secondary structure		T								T	T								S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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